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NECEvent2014_4_4_scaffold_302

Alias: 174_004_scaffold_302

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_302_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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385..1131
DNA (747bp) protein (249aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Peptidyl-prolyl cis-trans isomerase family protein n=9 Tax=Clostridium perfringens RepID=H7CS63_CLOPF rbh
peptidyl-prolyl cis-trans isomerase
NECEvent2014_4_4_scaffold_302_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1595..2407
DNA (813bp) protein (271aa)
ABC-2 type transporter, permease protein n=5 Tax=Clostridium perfringens RepID=Q0TUG6_CLOP1 rbh
ABC-2 type transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str.
NECEvent2014_4_4_scaffold_302_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2425..3597
DNA (1173bp) protein (391aa)
ABC transporter, ATP-binding protein n=9 Tax=Clostridium perfringens RepID=H7CS65_CLOPF rbh
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS79276.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
NECEvent2014_4_4_scaffold_302_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3611..4894
DNA (1284bp) protein (428aa)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT13525.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT13525.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
Teichuronic acid biosynthesis glycosyl transferase n=10 Tax=Clostridium perfringens RepID=H7CS66_CLOPF rbh
teichuronic acid biosynthesis glycosyl transferase
NECEvent2014_4_4_scaffold_302_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4913..6148
DNA (1236bp) protein (412aa)
glycoside hydrolase family protein (EC:2.4.1.-)
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT13528.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT13528.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
Glycosyl transferase, group 1 family protein n=8 Tax=Clostridium perfringens RepID=H7CS67_CLOPF rbh
NECEvent2014_4_4_scaffold_302_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6162..7343
DNA (1182bp) protein (394aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridium perfringens RepID=Q0SWB1_CLOPS rbh
teichoic acid ABC transporter ATP-binding protein
Probable ABC transporter {ECO:0000313|EMBL:BAB79979.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_4_scaffold_302_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7458..8891
DNA (1434bp) protein (478aa)
glycoside hydrolase family protein (EC:2.4.1.-)
Glycosyl transferase, group 1 family protein n=3 Tax=Clostridium perfringens RepID=H7CS69_CLOPF rbh
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EIA18480.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
NECEvent2014_4_4_scaffold_302_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9000..9653)
DNA (654bp) protein (218aa)
Haloacid dehalogenase, IA family protein n=5 Tax=Clostridium perfringens RepID=H7CS70_CLOPF rbh
haloacid dehalogenase
Haloacid dehalogenase, IA family protein {ECO:0000313|EMBL:EDT13531.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfri
NECEvent2014_4_4_scaffold_302_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9736..11085)
DNA (1350bp) protein (450aa)
[Fe] hydrogenase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBI1_CLOPF rbh
[Fe] hydrogenase {ECO:0000313|EMBL:EDT22406.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;
[Fe] hydrogenase
NECEvent2014_4_4_scaffold_302_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11220..11366
DNA (147bp) protein (49aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS72_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25608.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_4_4_scaffold_302_trna_1
unknown

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comp(11546..11618)
DNA (73bp)
transferRNA
NECEvent2014_4_4_scaffold_302_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11784..12074
DNA (291bp) protein (97aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CS73_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18484.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_302_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12259..13557
DNA (1299bp) protein (433aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XNQ4_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79984.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_4_scaffold_302_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13731..14501
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XNQ3_CLOPE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB79985.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_4_scaffold_302_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14504..15346
DNA (843bp) protein (281aa)
tetrapyrrole methylase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=7 Tax=Clostridium perfringens RepID=H7CS77_CLOPF rbh
NECEvent2014_4_4_scaffold_302_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15662..15901)
DNA (240bp) protein (80aa)
AbrB family transcriptional regulator n=6 Tax=Clostridium perfringens RepID=H7CS78_CLOPF
AbrB family transcriptional regulator
AbrB family transcriptional regulator {ECO:0000313|EMBL:EIA18400.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
Displaying 16 items

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