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NECEvent2014_4_4_scaffold_115_11

Organism: NECEvent2014_4_4_Clostridium_perfringens_27_15

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(6651..7469)

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 272.0
  • Bit_score: 559
  • Evalue 7.10e-157
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 272.0
  • Bit_score: 559
  • Evalue 3.50e-156
Diaminopimelate epimerase n=4 Tax=Clostridium perfringens RepID=H7CXP0_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 272.0
  • Bit_score: 559
  • Evalue 2.50e-156
  • rbh

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 819
ATGAAGTTTTCAAAAATGCATGGAAATGGAAATGATTTTATAGTTATAGAAGATTTAAACAATGAGTATTTAGGTAAAGAGGGAGAAATTGCTCAAAAAATGTGCCATAGAAGATTTGGAATTGGTGCAGATGGGATTTTAATAGTTAGAAAGAATGAAAATTGTGATATAGAAATGGTAATAATAAATTCAGATGGATCTTATGCTGCTATGTGCGGAAATGGAATAAGATGTTTTGCTAAGTATGTCTACGAGAAGGGAATAGTAAAGAAAGATGTGCTAGATGTTTTAACAGGTGATGGAGTTAAAAGAATCTTTTTAGAAATTGAGAATGATAAGGTAAAAAGTATCAATGTAAATATGGGATTTGGAGACTTTAAACCAAAGAATATTCCAGCATTATGTGATGAAGAAATAATAGAAAAAAAAGTAAGTGTAGGAAATGGAAATTTTGAAATAACATCTTTACTTATGGGTGTTCCTCATACTATTATATTTGAGGAGGAAAAATATCCTATAGAATGTGGTAGGGACATAGAAAAGTATGAATTATTTCCTCAAGGAACAAATGTTAACTTCTGCAAAGTAATTGATAGAAATACAATGGAAGTTAGAACTTGGGAAAGAGGTGCAGGCCCAACCTTAGCATGTGGAACAGGAAATTGTGCTTCAGTTATAGCTGCTAATAAATTAGGTCTTGTAGATAAAGAAGTAAAGGTAATAGTTCCTGGTGGAGAATTAAAAGTTAATATTGAAGATGATGGAGTAAAAATGATAGGTAATGCGTCATTTATTTGTGATGGCACATATTTATTTTAG
PROTEIN sequence
Length: 273
MKFSKMHGNGNDFIVIEDLNNEYLGKEGEIAQKMCHRRFGIGADGILIVRKNENCDIEMVIINSDGSYAAMCGNGIRCFAKYVYEKGIVKKDVLDVLTGDGVKRIFLEIENDKVKSINVNMGFGDFKPKNIPALCDEEIIEKKVSVGNGNFEITSLLMGVPHTIIFEEEKYPIECGRDIEKYELFPQGTNVNFCKVIDRNTMEVRTWERGAGPTLACGTGNCASVIAANKLGLVDKEVKVIVPGGELKVNIEDDGVKMIGNASFICDGTYLF*