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NECEvent2014_4_4_scaffold_115

Alias: 174_004_scaffold_115

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_4_scaffold_115_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4..351)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIC4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26302.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_4_4_scaffold_115_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(339..788)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CXN1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16686.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_115_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(748..1365)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSH3_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT26303.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_4_4_scaffold_115_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1334..1744)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CXN3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16688.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_4_scaffold_115_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1731..1991)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIC8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT26296.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_4_4_scaffold_115_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2156..2668)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CXN5_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA16690.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_4_4_scaffold_115_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2658..3116)
DNA (459bp) protein (153aa)
Prepilin peptidase-dependent n=3 Tax=Clostridium perfringens RepID=H7CXN6_CLOPF
Prepilin peptidase-dependent {ECO:0000313|EMBL:EIA16691.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;
prepilin peptidase-dependent
NECEvent2014_4_4_scaffold_115_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3109..4128)
DNA (1020bp) protein (340aa)
Putative pilus biogenesis protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8W7_CLOPF rbh
Putative pilus biogenesis protein {ECO:0000313|EMBL:EDT23295.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B
pilus biogenesis protein
NECEvent2014_4_4_scaffold_115_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4115..5503)
DNA (1389bp) protein (463aa)
Putative pilus biogenesis protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RKY7_CLOPF rbh
pilus biogenesis protein
Putative pilus biogenesis protein {ECO:0000313|EMBL:EDT23281.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B
NECEvent2014_4_4_scaffold_115_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5603..6634)
DNA (1032bp) protein (344aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3U1_CLOPF rbh
Putative lipoprotein {ECO:0000313|EMBL:EDT71523.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721
hypothetical protein
NECEvent2014_4_4_scaffold_115_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6651..7469)
DNA (819bp) protein (273aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=4 Tax=Clostridium perfringens RepID=H7CXP0_CLOPF rbh
NECEvent2014_4_4_scaffold_115_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7561..9288
DNA (1728bp) protein (576aa)
Fibronectin-binding protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8W3_CLOPF rbh
Fibronectin-binding protein {ECO:0000313|EMBL:EDT23333.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
fibronectin-binding protein
NECEvent2014_4_4_scaffold_115_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9399..10526)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XJB3_CLOPE rbh
methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:BAB81554.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_4_scaffold_115_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10546..11082)
DNA (537bp) protein (179aa)
pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=11 Tax=Clostridium perfringens RepID=PYRR_CLOP1 rbh
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_4_4_scaffold_115_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11086..12006)
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Pseudouridine synthase n=6 Tax=Clostridium perfringens RepID=H7CXP4_CLOPF rbh
RluA family pseudouridine synthase
NECEvent2014_4_4_scaffold_115_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12144..12770)
DNA (627bp) protein (209aa)
Cell-division initiation protein DivIVA n=8 Tax=Clostridium perfringens RepID=H7CXP5_CLOPF rbh
cell division protein DivIVA
Cell-division initiation protein DivIVA {ECO:0000313|EMBL:EIA16700.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_4_4_scaffold_115_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12783..13544)
DNA (762bp) protein (254aa)
S4 domain-containing protein n=4 Tax=Clostridium perfringens RepID=H7CXP6_CLOPF rbh
S4 domain-containing protein
S4 domain-containing protein {ECO:0000313|EMBL:EIA16701.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;
NECEvent2014_4_4_scaffold_115_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13546..13995)
DNA (450bp) protein (150aa)
Cell division protein SepF n=10 Tax=Clostridium perfringens RepID=SEPF_CLOP1
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
NECEvent2014_4_4_scaffold_115_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14014..14673)
DNA (660bp) protein (220aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXP8_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15109.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_4_4_scaffold_115_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14773..15504)
DNA (732bp) protein (244aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CXP9_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15079.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_4_4_scaffold_115_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15517..15855)
DNA (339bp) protein (113aa)
Small basic protein n=10 Tax=Clostridium perfringens RepID=H7CXQ0_CLOPF
sbp; small basic protein
Small basic protein {ECO:0000313|EMBL:EDT25558.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.
NECEvent2014_4_4_scaffold_115_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15868..16584)
DNA (717bp) protein (239aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CXQ2_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16707.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_115_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16598..17344)
DNA (747bp) protein (249aa)
Cell division protein FtsQ n=6 Tax=Clostridium perfringens RepID=H7CXQ3_CLOPF rbh
cell division protein FtsQ
Uncharacterized protein {ECO:0000313|EMBL:BAB81564.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_4_scaffold_115_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17502..18626)
DNA (1125bp) protein (375aa)
Stage V sporulation protein E n=8 Tax=Clostridium perfringens RepID=H7CXQ4_CLOPF rbh
spoVE; stage V sporulation protein E
Stage V sporulation protein E {ECO:0000313|EMBL:EIA16709.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_4_4_scaffold_115_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18654..19625)
DNA (972bp) protein (324aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=9 Tax=Clostridium perfringens RepID=MRAY_CLOP1 rbh
NECEvent2014_4_4_scaffold_115_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19675..21036)
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostr
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJ00_CLOPF rbh
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
NECEvent2014_4_4_scaffold_115_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21049..22503)
DNA (1455bp) protein (485aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RKF9_CLOPF rbh
NECEvent2014_4_4_scaffold_115_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22598..24817)
DNA (2220bp) protein (740aa)
Stage V sporulation protein D n=2 Tax=Clostridium perfringens RepID=B1R8U7_CLOPF rbh
Stage V sporulation protein D {ECO:0000313|EMBL:EDT23323.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str
spoVD; stage V sporulation protein D
NECEvent2014_4_4_scaffold_115_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25005..25433)
DNA (429bp) protein (143aa)
Cell division protein FtsL n=6 Tax=Clostridium perfringens RepID=H7CXQ9_CLOPF
cell division protein FtsL
Cell division protein FtsL {ECO:0000313|EMBL:EIA16714.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_4_scaffold_115_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25505..26437)
DNA (933bp) protein (311aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=9 Tax=Clostridium perfringens RepID=RSMH_CLOP1 rbh
Displaying items 1-30 of 41 in total

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