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NECEvent2014_4_4_scaffold_115_15

Organism: NECEvent2014_4_4_Clostridium_perfringens_27_15

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(11086..12006)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 306.0
  • Bit_score: 617
  • Evalue 1.20e-173
Pseudouridine synthase n=6 Tax=Clostridium perfringens RepID=H7CXP4_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 306.0
  • Bit_score: 617
  • Evalue 8.80e-174
  • rbh
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 306.0
  • Bit_score: 617
  • Evalue 2.50e-174

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 921
ATGAGTTTAAGTAAAGAAGTAATAAAAATAACTGAAGAAGAAAAAGGAATAAGAGCAGATAAATTTTTAGCTCTTAAAATAGATGGAGTTTCAAGAAACTTTATTCAAGGGCTTTTTGATGATGGGAAAATTTTAATTAATGGAAAAGCAGAAAAGGGAAAATATAAGCTTTCAGTTGGAGATTGCGTTGAGGTGGAAATACCAGAACCAGAGGAATTAAAAGTTGAAGCTGAGGATATCCCATTAAATATAGTTTATGAAGATGAAGATGTAATAGTAGTTAATAAACCAAAGGGAATGGTAGTTCATCCTGCACCGGGAAATTATACTGGAACTTTAGTTAATGCATTATTACACCATTGTGATGATTTATCAGGAATAAACGGGGTTATAAGACCTGGAATAGTACACAGAATAGATAAAGATACTTCTGGAATATTAGTTGTTGCAAAAAATGATAATGCTCATCAAAAACTAGCAGAACAATTTAAAGATCATAGCATAAAGAGAGAATACTATGCTATTGTTGAGGGAAGATTTAAAAAAGAAGGTGGCACAATTGATGCGCCTTTAGGAAGACATCATAGAGATAGATTAAAGTATGCTGTAGTTAAAGGTGGAAAGAGAGCAGTTACTCATTATGAAGTTCTTAAAGTATTTAATTCATGTTCCCTTGTTAAATGTACTTTAGAAACAGGAAGAACACATCAGATAAGAGTTCATATGGCCTTTATAGGGCATCCATTACTTGGAGATACTGTTTATGGCTTAAAGAAACAAAAGAAATTAAGTCAAGAGGGGCAAGTTCTTCATGCTAAAACATTAGGATTTATTCATCCTACTACTGGAGAATATGTTGAATTTGACTCAGAATTGCCAGAGTACTTTGAAAAAATTGTAGAGAAATTAGGAGGGTGTTAG
PROTEIN sequence
Length: 307
MSLSKEVIKITEEEKGIRADKFLALKIDGVSRNFIQGLFDDGKILINGKAEKGKYKLSVGDCVEVEIPEPEELKVEAEDIPLNIVYEDEDVIVVNKPKGMVVHPAPGNYTGTLVNALLHHCDDLSGINGVIRPGIVHRIDKDTSGILVVAKNDNAHQKLAEQFKDHSIKREYYAIVEGRFKKEGGTIDAPLGRHHRDRLKYAVVKGGKRAVTHYEVLKVFNSCSLVKCTLETGRTHQIRVHMAFIGHPLLGDTVYGLKKQKKLSQEGQVLHAKTLGFIHPTTGEYVEFDSELPEYFEKIVEKLGGC*