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NECEvent2014_4_5_scaffold_576

Alias: 174_005_scaffold_576

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_576_1
unknown

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2..100
DNA (99bp) protein (33aa)

This feature has no annotations

NECEvent2014_4_5_scaffold_576_2
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(97..285)
DNA (189bp) protein (63aa)
Putative transposase n=1 Tax=Shigella dysenteriae 155-74 RepID=F3VCM0_SHIDY
Genome assembly 8917 {ECO:0000313|EMBL:CEP30393.1}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variico
hypothetical protein
NECEvent2014_4_5_scaffold_576_3
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(688..1641)
DNA (954bp) protein (318aa)
UPI0003CEEEA4 related cluster n=1 Tax=unknown RepID=UPI0003CEEEA4 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ESY64049.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
LysR family transcriptional regulator
NECEvent2014_4_5_scaffold_576_4
unknown

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1653..1778
DNA (126bp) protein (42aa)

This feature has no annotations

NECEvent2014_4_5_scaffold_576_5
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1775..3046
DNA (1272bp) protein (424aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E5J2_PSEDT rbh
glycine hydroxymethyltransferase
NECEvent2014_4_5_scaffold_576_6
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3109..4431
DNA (1323bp) protein (441aa)
Probable D-serine dehydratase {ECO:0000256|HAMAP-Rule:MF_01030}; EC=4.3.1.18 {ECO:0000256|HAMAP-Rule:MF_01030};; D-serine deaminase {ECO:0000256|HAMAP-Rule:MF_01030}; TaxID=985010 species="Bacteria; P
Probable D-serine dehydratase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E5J1_PSEDT rbh
D-serine dehydratase
NECEvent2014_4_5_scaffold_576_7
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4556..5455
DNA (900bp) protein (300aa)
Bifunctional protein FolD n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y1F3_PARAH rbh
5,10-methylene-tetrahydrofolate dehydrogenase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
NECEvent2014_4_5_scaffold_576_8
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5466..6380
DNA (915bp) protein (305aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=985010 species="Ba
Formyltetrahydrofolate deformylase n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E5I9_PSEDT rbh
purU; formyltetrahydrofolate deformylase
NECEvent2014_4_5_scaffold_576_9
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6499..7845
DNA (1347bp) protein (449aa)
Gluconate transporter n=2 Tax=Pseudomonas RepID=F0E5I7_PSEDT rbh
Gluconate transporter {ECO:0000313|EMBL:EGB98329.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (str
gluconate transporter rbh
NECEvent2014_4_5_scaffold_576_10
Enterobacter sp. 35027, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8031..9569)
DNA (1539bp) protein (513aa)
IS66 family element, transposase n=1 Tax=Shigella sp. MO17 RepID=G3CAL0_9ENTR rbh
transposase rbh
Transposase {ECO:0000313|EMBL:KJN96072.1}; TaxID=1619239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35027.;
NECEvent2014_4_5_scaffold_576_11
Raoultella ornithinolytica, Raoultella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9619..9966)
DNA (348bp) protein (116aa)
Element, Orf2 protein, IS66 family n=1 Tax=Hafnia alvei ATCC 51873 RepID=G9Y6I3_HAFAL
isocitrate lyase
Isocitrate lyase {ECO:0000313|EMBL:KIZ44814.1}; TaxID=54291 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Raoultella.;" source="Raoultella ornithinolyt
NECEvent2014_4_5_scaffold_576_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9963..10367)
DNA (405bp) protein (135aa)
Transposase family protein n=1 Tax=Klebsiella pneumoniae JHCK1 RepID=M3UCQ3_KLEPN
ISSfl3 protein
Transposase {ECO:0000313|EMBL:KJC00354.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source=
NECEvent2014_4_5_scaffold_576_13
Cedecea neteri, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11092..12117
DNA (1026bp) protein (342aa)
UPI0003C7F7F8 related cluster n=1 Tax=unknown RepID=UPI0003C7F7F8 rbh
nickel transporter
Nickel transporter {ECO:0000313|EMBL:AIR60047.1}; TaxID=158822 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="Cedecea neteri.;"
NECEvent2014_4_5_scaffold_576_14
Brenneria sp. EniD312, Brenneria, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12340..12603)
DNA (264bp) protein (88aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
Urea ABC transporter, ATP-binding protein UrtE {ECO:0000313|EMBL:EHD21356.1}; EC=3.6.3.30 {ECO:0000313|EMBL:EHD21356.1};; TaxID=598467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobac
Urea ABC transporter, ATP-binding protein UrtE n=1 Tax=Brenneria sp. EniD312 RepID=G7LJX0_9ENTR
NECEvent2014_4_5_scaffold_576_15
Klebsiella quasipneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12767..13108)
DNA (342bp) protein (114aa)
TolA n=4 Tax=Enterobacteriaceae RepID=U5N6Q5_KLEPN
Uncharacterized protein {ECO:0000313|EMBL:CDN00036.1}; TaxID=1463165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella sp.
Tol-Pal system TolA
NECEvent2014_4_5_scaffold_576_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13209..13463
DNA (255bp) protein (85aa)
Transposase family protein n=67 Tax=Enterobacteriaceae RepID=M9DSH4_ECOLX
Transposase {ECO:0000313|EMBL:EII22793.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
transposase
Displaying 16 items

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