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NECEvent2014_4_5_scaffold_977

Alias: 174_005_scaffold_977

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_977_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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126..806
DNA (681bp) protein (227aa)
Elongation factor Ts n=5 Tax=Veillonella RepID=D1BMD1_VEIPT rbh
translation elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Seleno
NECEvent2014_4_5_scaffold_977_2
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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869..1594
DNA (726bp) protein (242aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=2 Tax=Veillonella RepID=D1BMD2_VEIPT rbh
uridylate kinase
NECEvent2014_4_5_scaffold_977_3
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1600..2160
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=2 Tax=Veillonella RepID=D1BMD3_VEIPT rbh
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=457416 species="Bacteria;
NECEvent2014_4_5_scaffold_977_4
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2160..2411
DNA (252bp) protein (84aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=D1BMD4_VEIPT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFG23605.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_
NECEvent2014_4_5_scaffold_977_5
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2392..3156
DNA (765bp) protein (255aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Vei
Isoprenyl transferase n=2 Tax=Veillonella RepID=D1BMD5_VEIPT rbh
UDP diphosphate synthase
NECEvent2014_4_5_scaffold_977_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3160..3984
DNA (825bp) protein (275aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonell
Phosphatidate cytidylyltransferase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMD6_VEIPT rbh
phosphatidate cytidylyltransferase
NECEvent2014_4_5_scaffold_977_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4003..5148
DNA (1146bp) protein (382aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KHL1_9FIRM rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase
NECEvent2014_4_5_scaffold_977_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5157..6173
DNA (1017bp) protein (339aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillon
Membrane-associated zinc metalloprotease n=3 Tax=Veillonella RepID=D1BMD8_VEIPT rbh
membrane-associated zinc metalloprotease
NECEvent2014_4_5_scaffold_977_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6192..7277
DNA (1086bp) protein (362aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hyd
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=6 Tax=Veillonella RepID=D1BMD9_VEIPT rbh
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
NECEvent2014_4_5_scaffold_977_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7271..8683
DNA (1413bp) protein (471aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
Proline--tRNA ligase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BME0_VEIPT
prolyl-tRNA synthetase
NECEvent2014_4_5_scaffold_977_11
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8800..9627
DNA (828bp) protein (276aa)
UPI0003D59D99 related cluster n=1 Tax=unknown RepID=UPI0003D59D99 rbh
PHP protein {ECO:0000313|EMBL:ETI97806.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
PHP domain-containing protein
NECEvent2014_4_5_scaffold_977_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9643..10518
DNA (876bp) protein (292aa)
Uncharacterized protein n=6 Tax=Veillonella RepID=D1BME2_VEIPT rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGL78035.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula
NECEvent2014_4_5_scaffold_977_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10527..11840
DNA (1314bp) protein (438aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=3 Tax=Veillonella RepID=D6KHL7_9FIRM rbh
MiaB family RNA modification protein
NECEvent2014_4_5_scaffold_977_14
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12024..12119
DNA (96bp) protein (32aa)
UPI0003D6408D related cluster n=1 Tax=unknown RepID=UPI0003D6408D
O-methyltransferase protein {ECO:0000313|EMBL:ETI97803.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_
Displaying 14 items

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