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NECEvent2014_4_5_scaffold_1476

Alias: 174_005_scaffold_1476

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_1476_1
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3..656)
DNA (654bp) protein (218aa)
Protein translocase subunit SecA n=2 Tax=Veillonella RepID=D6KHG0_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillone
preprotein translocase subunit SecA
NECEvent2014_4_5_scaffold_1476_2
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(851..1378)
DNA (528bp) protein (176aa)
Ribosomal subunit interface protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KML8_9FIRM rbh
Ribosomal subunit interface protein {ECO:0000313|EMBL:ETI97490.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella disp
sigma 54 modulation protein/ribosomal protein S30EA
NECEvent2014_4_5_scaffold_1476_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1621..1818)
DNA (198bp) protein (66aa)
Cold-shock DNA-binding domain protein n=6 Tax=Veillonella RepID=D1BM72_VEIPT
cold-shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:EFB86746.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella par
NECEvent2014_4_5_scaffold_1476_4
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2335..2736)
DNA (402bp) protein (134aa)
ABC transporter, ATP-binding protein n=3 Tax=Veillonella RepID=D1YM98_9FIRM
ABC transporter
Glutamine ABC transporter, ATP-binding protein GlnQ {ECO:0000313|EMBL:EGL78024.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="V
NECEvent2014_4_5_scaffold_1476_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2763..2879)
DNA (117bp) protein (39aa)
UPI0003D64E84 related cluster n=1 Tax=unknown RepID=UPI0003D64E84
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ24478.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (
NECEvent2014_4_5_scaffold_1476_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2876..3532)
DNA (657bp) protein (219aa)
Glutamate transport membrane-spanning protein n=4 Tax=Veillonella RepID=T0T2U4_9FIRM rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EFB86744.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula
polar amino acid ABC transporter permease
NECEvent2014_4_5_scaffold_1476_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3544..4350)
DNA (807bp) protein (269aa)
UPI0003D65D6F related cluster n=1 Tax=unknown RepID=UPI0003D65D6F rbh
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ETI97486.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillo
NECEvent2014_4_5_scaffold_1476_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5143..5538
DNA (396bp) protein (132aa)
HDIG domain protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KML3_9FIRM
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACZ24475.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula
NECEvent2014_4_5_scaffold_1476_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5693..5854)
DNA (162bp) protein (54aa)
Amidophosphoribosyltransferase-like protein n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BM67_VEIPT
amidophosphoribosyltransferase-like protein
Amidophosphoribosyltransferase-like protein {ECO:0000313|EMBL:ACZ24474.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonel
NECEvent2014_4_5_scaffold_1476_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5829..6170)
DNA (342bp) protein (114aa)
ComF family protein n=4 Tax=Veillonella RepID=D1YM91_9FIRM
amidophosphoribosyltransferase-like protein
ComF family protein {ECO:0000313|EMBL:EGL77742.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch
NECEvent2014_4_5_scaffold_1476_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6170..8323)
DNA (2154bp) protein (718aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veil
Helicase, RecD/TraA family n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BM66_VEIPT
RecD/TraA family helicase
NECEvent2014_4_5_scaffold_1476_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8323..9087)
DNA (765bp) protein (255aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=768727 species="Bacteria; Firmicutes; Negativicut
Shikimate kinase n=4 Tax=Veillonella RepID=D1YM89_9FIRM
shikimate kinase
NECEvent2014_4_5_scaffold_1476_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9100..9822)
DNA (723bp) protein (241aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=768727 species="Bacteria; Firmicutes;
UPI0003D6455D related cluster n=1 Tax=unknown RepID=UPI0003D6455D
riboflavin biosynthesis protein RibF
NECEvent2014_4_5_scaffold_1476_14
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9888..10799)
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=3 Tax=Veillonella RepID=D1YM87_9FIRM
tRNA pseudouridine synthase B
NECEvent2014_4_5_scaffold_1476_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10802..11743)
DNA (942bp) protein (314aa)
DHHA1 domain protein n=4 Tax=Veillonella RepID=D1YM86_9FIRM rbh
DHHA1 domain protein {ECO:0000313|EMBL:EGL78195.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sc
phosphoesterase RecJ domain-containing protein
NECEvent2014_4_5_scaffold_1476_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11761..12117)
DNA (357bp) protein (119aa)
Ribosome-binding factor A n=3 Tax=Veillonella RepID=D1YM85_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
ribosome-binding factor A
NECEvent2014_4_5_scaffold_1476_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12127..14409)
DNA (2283bp) protein (761aa)
Translation initiation factor IF-2 n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KHE6_9FIRM rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillo
translation initiation factor IF-2
NECEvent2014_4_5_scaffold_1476_18
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14425..14730)
DNA (306bp) protein (102aa)
Ribosomal protein L7Ae n=2 Tax=Veillonella RepID=C4FR86_9FIRM
Ribosomal protein L7Ae {ECO:0000313|EMBL:EEP65429.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.
ribosomal protein L7Ae/L30e/S12e/Gadd45
NECEvent2014_4_5_scaffold_1476_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14743..14991)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Veillonella parvula RepID=D1YM82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB86872.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 1774
hypothetical protein
NECEvent2014_4_5_scaffold_1476_20
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15015..15932)
DNA (918bp) protein (306aa)
NusA antitermination factor n=2 Tax=Veillonella parvula RepID=D1BM57_VEIPT
NusA protein {ECO:0000313|EMBL:EKY20539.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
NusA antitermination factor
NECEvent2014_4_5_scaffold_1476_21
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15977..16288)
DNA (312bp) protein (104aa)
Ribosome maturation factor RimP n=4 Tax=Veillonella RepID=D1YM80_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillone
hypothetical protein
NECEvent2014_4_5_scaffold_1476_22
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16570..17277)
DNA (708bp) protein (236aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=D1YM79_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFG23540.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_
hypothetical protein
NECEvent2014_4_5_scaffold_1476_23
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17249..17803)
DNA (555bp) protein (185aa)
Transglycosylase SLT domain protein n=4 Tax=Veillonella RepID=D1YM78_9FIRM rbh
Transglycosylase {ECO:0000313|EMBL:EFG23539.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
lytic transglycosylase
NECEvent2014_4_5_scaffold_1476_24
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17965..18567)
DNA (603bp) protein (201aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=457416 species="Bacteria; Fi
Dephospho-CoA kinase n=3 Tax=Veillonella RepID=D1YM77_9FIRM rbh
dephospho-CoA kinase
NECEvent2014_4_5_scaffold_1476_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18597..21068)
DNA (2472bp) protein (824aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
DNA polymerase n=3 Tax=Veillonella RepID=D6KHE0_9FIRM
DNA polymerase I
Displaying 25 items

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