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NECEvent2014_4_5_scaffold_1924

Alias: 174_005_scaffold_1924

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_1924_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3..1232)
DNA (1230bp) protein (410aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQJ9_9FIRM
DNA-directed RNA polymerase subunit beta'
NECEvent2014_4_5_scaffold_1924_2
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1262..1615)
DNA (354bp) protein (118aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KK32_9FIRM
DNA-directed RNA polymerase subunit beta
NECEvent2014_4_5_scaffold_1924_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1679..3439)
DNA (1761bp) protein (587aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KK32_9FIRM
DNA-directed RNA polymerase subunit beta
NECEvent2014_4_5_scaffold_1924_4
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3396..3830)
DNA (435bp) protein (145aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KK32_9FIRM
DNA-directed RNA polymerase subunit beta
NECEvent2014_4_5_scaffold_1924_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3842..4786)
DNA (945bp) protein (315aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=22 Tax=Veillonella RepID=T0T1W8_9FIRM
DNA-directed RNA polymerase subunit beta
NECEvent2014_4_5_scaffold_1924_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5078..6493)
DNA (1416bp) protein (472aa)
Aspartate ammonia-lyase n=2 Tax=Veillonella RepID=D6KQJ7_9FIRM rbh
Putative aspartate ammonia-lyase {ECO:0000313|EMBL:EGL78350.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula
fumarate lyase
NECEvent2014_4_5_scaffold_1924_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6714..8147
DNA (1434bp) protein (478aa)
UPI0003D698AE related cluster n=2 Tax=unknown RepID=UPI0003D698AE rbh
Glycosyl transferase family 39 {ECO:0000313|EMBL:ETJ02238.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DO
glycosyl transferase family protein
NECEvent2014_4_5_scaffold_1924_8
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(8357..8854)
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=2 Tax=Veillonella RepID=D1BP76_VEIPT rbh
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.
NECEvent2014_4_5_scaffold_1924_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(9030..9740)
DNA (711bp) protein (237aa)
50S ribosomal protein L1 n=5 Tax=Veillonella RepID=D1BP77_VEIPT rbh
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC
NECEvent2014_4_5_scaffold_1924_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(9817..10242)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=12 Tax=Veillonella RepID=D1BP78_VEIPT
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
NECEvent2014_4_5_scaffold_1924_11
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10235..10705)
DNA (471bp) protein (157aa)
Transcription termination/antitermination protein NusG n=5 Tax=Veillonella RepID=E1L6A4_9FIRM
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Ve
NECEvent2014_4_5_scaffold_1924_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10718..10939)
DNA (222bp) protein (74aa)
Protein translocase subunit SecE n=4 Tax=Veillonella parvula RepID=D1BP80_VEIPT
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella par
NECEvent2014_4_5_scaffold_1924_13
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(10983..11132)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=13 Tax=Veillonella RepID=D1BP81_VEIPT
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
NECEvent2014_4_5_scaffold_1924_14
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11403..12002)
DNA (600bp) protein (200aa)
Nitric oxide reductase large subunit-like protein n=5 Tax=Veillonella RepID=D1BP82_VEIPT
nitric oxide reductase large subunit-like protein
Nitric oxide reductase {ECO:0000313|EMBL:EFG23232.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
NECEvent2014_4_5_scaffold_1924_15
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11966..13432)
DNA (1467bp) protein (489aa)
Nitric oxide reductase large subunit-like protein n=5 Tax=Veillonella RepID=D1BP82_VEIPT rbh
nitric oxide reductase large subunit-like protein
Nitric oxide reductase {ECO:0000313|EMBL:EFG23232.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Displaying 15 items

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