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NECEvent2014_4_5_scaffold_2301

Alias: 174_005_scaffold_2301

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_2301_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14..643
DNA (630bp) protein (210aa)
DNA polymerase III, epsilon subunit n=2 Tax=Veillonella parvula RepID=D1YMZ1_9FIRM rbh
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EFB86231.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvu
exonuclease RNase T and DNA polymerase III
NECEvent2014_4_5_scaffold_2301_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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658..1320
DNA (663bp) protein (221aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
Deoxyribose-phosphate aldolase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YN61_9FIRM rbh
deoxyribose-phosphate aldolase
NECEvent2014_4_5_scaffold_2301_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1374..2426
DNA (1053bp) protein (351aa)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EQC67406.1}; EC=2.4.2.2 {ECO:0000313|EMBL:EQC67406.1};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellace
UPI0003D5965C related cluster n=1 Tax=unknown RepID=UPI0003D5965C rbh
pyrimidine-nucleoside phosphorylase
NECEvent2014_4_5_scaffold_2301_4
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2411..2548
DNA (138bp) protein (46aa)
UPI0003D5965C related cluster n=1 Tax=unknown RepID=UPI0003D5965C
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:ETJ00868.1}; Flags: Fragment;; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source
pyrimidine-nucleoside phosphorylase
NECEvent2014_4_5_scaffold_2301_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2559..2954
DNA (396bp) protein (132aa)
Cytidine deaminase {ECO:0000313|EMBL:EFB86228.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EFB86228.1};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
Cytidine deaminase n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YN59_9FIRM
cytidine deaminase
NECEvent2014_4_5_scaffold_2301_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3188..3397)
DNA (210bp) protein (70aa)
Lipoprotein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YN58_9FIRM
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
lipoprotein
NECEvent2014_4_5_scaffold_2301_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3540..4487)
DNA (948bp) protein (316aa)
UPI0003D661A5 related cluster n=1 Tax=unknown RepID=UPI0003D661A5 rbh
1,4-dihydroxy-2-naphthoateoctaprenyltransferase {ECO:0000313|EMBL:ETI98329.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veil
1,4-dihydroxy-2-naphthoateoctaprenyltransferase
NECEvent2014_4_5_scaffold_2301_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4685..4795
DNA (111bp) protein (37aa)
Putative glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KLK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB86225.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 1774
hypothetical protein
NECEvent2014_4_5_scaffold_2301_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4789..5538
DNA (750bp) protein (250aa)
Putative lipoprotein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L1T1_9FIRM rbh
Putative lipoprotein {ECO:0000313|EMBL:EGL76832.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sc
hypothetical protein
NECEvent2014_4_5_scaffold_2301_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5538..6161
DNA (624bp) protein (208aa)
Conserved domain protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L1T2_9FIRM rbh
Conserved domain protein {ECO:0000313|EMBL:EGL76836.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-
hypothetical protein
Displaying 10 items

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