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NECEvent2014_4_5_Veillonella_parvula-rel_38_741_partial

NECEvent2014_4_5_Veillonella_38_737
In projects: NECEvent2014_4_5

Consensus taxonomy: Veillonella  →  Selenomonadales  →  Negativicutes  →  Firmicutes  →  Bacteria

Displaying items 1-50 of 259 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_1159 174_005_scaffold_1159
Species: Veillonella dispar (72.73%)
11 6151 bp 31.72 11.53 85.25
NECEvent2014_4_5_scaffold_2139 174_005_scaffold_2139
Species: Veillonella dispar (66.67%)
3 2660 bp 42.78 15.56 94.17
NECEvent2014_4_5_scaffold_3893 174_005_scaffold_3893
Species: Veillonella sp. DORA_B_18_19_23 (50%)
2 1134 bp 35.63 18.39 69.31
NECEvent2014_4_5_scaffold_3391 174_005_scaffold_3391
Species: Veillonella dispar (100%)
2 1372 bp 41.84 21.21 101.02
NECEvent2014_4_5_scaffold_1071 174_005_scaffold_1071
Species: Veillonella dispar (75%)
8 6961 bp 34.97 36.68 87.88
NECEvent2014_4_5_scaffold_4050 174_005_scaffold_4050
Species: Veillonella dispar (100%)
1 1075 bp 41.21 49.67 99.91
NECEvent2014_4_5_scaffold_2163 174_005_scaffold_2163
Species: Veillonella dispar (66.67%)
3 2635 bp 37.12 95.69 86.64
NECEvent2014_4_5_scaffold_2440 174_005_scaffold_2440
Species: Veillonella dispar (66.67%)
3 2234 bp 40.69 126.63 91.99
NECEvent2014_4_5_scaffold_3257 174_005_scaffold_3257
Species: Veillonella dispar (100%)
1 1458 bp 38.96 172.94 84.36
NECEvent2014_4_5_scaffold_3045 174_005_scaffold_3045
Species: Veillonella dispar (66.67%)
3 1585 bp 30.09 205.08 92.93
NECEvent2014_4_5_scaffold_3765 174_005_scaffold_3765
Species: Veillonella dispar (100%)
2 1190 bp 41.43 214.41 100.59
NECEvent2014_4_5_scaffold_3760 174_005_scaffold_3760
Species: Veillonella dispar (100%)
1 1192 bp 39.93 225.13 61.41
NECEvent2014_4_5_scaffold_3304 174_005_scaffold_3304
Species: Veillonella dispar (100%)
1 1429 bp 43.53 253.08 99.93
NECEvent2014_4_5_scaffold_3433 174_005_scaffold_3433
Species: Veillonella sp. 3_1_44 (100%)
1 1355 bp 40.22 337.42 89.45
NECEvent2014_4_5_scaffold_3529 174_005_scaffold_3529
Species: Veillonella dispar (50%)
4 1310 bp 40.92 348.32 97.33
NECEvent2014_4_5_scaffold_4233 174_005_scaffold_4233
Species: Veillonella sp. 3_1_44 (50%)
2 1011 bp 45.99 428.49 96.44
NECEvent2014_4_5_scaffold_1214 174_005_scaffold_1214
Genus: Veillonella (90.91%)
11 14277 bp 35.57 482.73 92.60
NECEvent2014_4_5_scaffold_3701 174_005_scaffold_3701
Species: Veillonella sp. 3_1_44 (100%)
1 1217 bp 39.36 494.62 65.57
NECEvent2014_4_5_scaffold_3996 174_005_scaffold_3996
Species: Veillonella parvula (100%)
2 1094 bp 36.93 503.34 99.82
NECEvent2014_4_5_scaffold_1407 174_005_scaffold_1407
Species: Veillonella parvula (100%)
4 4780 bp 32.30 550.64 86.36
NECEvent2014_4_5_scaffold_1609 174_005_scaffold_1609
Species: Veillonella parvula (60%)
5 5356 bp 34.04 569.39 67.21
NECEvent2014_4_5_scaffold_3385 174_005_scaffold_3385
Species: Veillonella parvula (100%)
1 1379 bp 36.62 577.59 99.86
NECEvent2014_4_5_scaffold_3845 174_005_scaffold_3845
Species: Veillonella parvula (66.67%)
3 1151 bp 34.93 595.96 77.93
NECEvent2014_4_5_scaffold_902 174_005_scaffold_902
Genus: Veillonella (92.31%)
13 9913 bp 35.17 596.81 84.65
NECEvent2014_4_5_scaffold_1095 174_005_scaffold_1095
Genus: Veillonella (83.33%)
12 12505 bp 32.90 619.23 90.08
NECEvent2014_4_5_scaffold_3420 174_005_scaffold_3420
Species: Veillonella parvula (100%)
2 1361 bp 29.02 619.40 92.14
NECEvent2014_4_5_scaffold_2580 174_005_scaffold_2580
Species: Veillonella parvula (50%)
2 2034 bp 40.71 620.72 89.68
NECEvent2014_4_5_scaffold_3038 174_005_scaffold_3038
Species: Veillonella sp. 6_1_27 (75%)
4 3403 bp 36.91 636.01 85.51
NECEvent2014_4_5_scaffold_1416 174_005_scaffold_1416
Genus: Veillonella (83.33%)
6 5521 bp 35.41 636.38 79.91
NECEvent2014_4_5_scaffold_2691 174_005_scaffold_2691
Species: Veillonella parvula (50%)
2 3078 bp 38.40 643.13 96.98
NECEvent2014_4_5_scaffold_960 174_005_scaffold_960
Species: Veillonella parvula (75%)
20 17429 bp 33.79 646.21 87.84
NECEvent2014_4_5_scaffold_2083 174_005_scaffold_2083
Species: Veillonella parvula (50%)
4 4510 bp 37.25 647.59 80.55
NECEvent2014_4_5_scaffold_2437 174_005_scaffold_2437
Species: Veillonella parvula (50%)
4 3219 bp 38.80 653.17 70.67
NECEvent2014_4_5_scaffold_910 174_005_scaffold_910
Species: Veillonella parvula (52.94%)
17 12903 bp 34.47 658.60 86.89
NECEvent2014_4_5_scaffold_2411 174_005_scaffold_2411
Genus: Veillonella (100%)
5 3933 bp 38.77 660.03 78.41
NECEvent2014_4_5_scaffold_978 174_005_scaffold_978
Phylum: Firmicutes (63.64%)
11 8648 bp 34.32 664.40 83.07
NECEvent2014_4_5_scaffold_2112 174_005_scaffold_2112
Genus: Veillonella (100%)
5 6174 bp 38.81 668.95 90.14
NECEvent2014_4_5_scaffold_1748 174_005_scaffold_1748
Genus: Veillonella (100%)
8 7380 bp 36.36 672.03 87.93
NECEvent2014_4_5_scaffold_1999 174_005_scaffold_1999
Species: Veillonella parvula (60%)
5 3622 bp 32.22 674.75 89.45
NECEvent2014_4_5_scaffold_2442 174_005_scaffold_2442
Species: Enterococcus faecium (50%)
2 2231 bp 34.92 674.76 99.24
NECEvent2014_4_5_scaffold_2091 174_005_scaffold_2091
Species: Veillonella parvula (50%)
4 2738 bp 40.39 676.10 87.00
NECEvent2014_4_5_scaffold_1567 174_005_scaffold_1567
Species: Veillonella parvula (55%)
20 18744 bp 37.40 676.37 91.81
NECEvent2014_4_5_scaffold_4195 174_005_scaffold_4195
Species: Veillonella sp. oral taxon 158 (66.67%)
3 1027 bp 35.54 677.99 82.38
NECEvent2014_4_5_scaffold_1635 174_005_scaffold_1635
Genus: Veillonella (100%)
3 3895 bp 36.89 678.56 84.11
NECEvent2014_4_5_scaffold_2657 174_005_scaffold_2657
Species: Veillonella parvula (50%)
4 2680 bp 35.78 680.09 83.96
NECEvent2014_4_5_scaffold_1476 174_005_scaffold_1476
Species: Veillonella parvula (56%)
25 21123 bp 36.27 685.98 87.69
NECEvent2014_4_5_scaffold_1808 174_005_scaffold_1808
Genus: Veillonella (77.78%)
18 14754 bp 36.01 688.42 83.27
NECEvent2014_4_5_scaffold_231 174_005_scaffold_231
Genus: Veillonella (62.86%)
35 41575 bp 34.50 691.72 88.50
NECEvent2014_4_5_scaffold_1645 174_005_scaffold_1645
Species: Veillonella parvula (62.5%)
16 14226 bp 37.22 693.04 91.54
NECEvent2014_4_5_scaffold_2890 174_005_scaffold_2890
Species: Veillonella sp. 6_1_27 (100%)
3 2526 bp 36.94 693.41 90.38
Displaying items 1-50 of 259 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.