ggKbase home page

NECEvent2014_4_5_scaffold_587

Alias: 174_005_scaffold_587

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_587_1
unknown

Not on your lists

comp(1..459)
DNA (459bp) protein (153aa)

This feature has no annotations

NECEvent2014_4_5_scaffold_587_2
Propionimicrobium lymphophilum, Propionimicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(649..2253)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Propionimicrobium lymphophilum ACS-093-V-SCH5 RepID=S2W1V5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD32315.1}; TaxID=883161 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionimicrobium.;" source="Propionimicrobium lymphop
hypothetical protein
NECEvent2014_4_5_scaffold_587_3
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2305..4125)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YV35_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ87742.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;
Allergen V5/Tpx-1 family protein
NECEvent2014_4_5_scaffold_587_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4713..5213
DNA (501bp) protein (167aa)
MarR family protein n=1 Tax=Clostridium difficile CD69 RepID=T3A3B1_CLODI
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CCK94667.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
MarR family transcriptional regulator
NECEvent2014_4_5_scaffold_587_5
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5256..6119
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium 10/96A RepID=U7TYK2_ENTFC rbh
Uncharacterized protein {ECO:0000313|EMBL:ERT48546.1}; TaxID=1391465 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 10/96A.;"
hypothetical protein
NECEvent2014_4_5_scaffold_587_6
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6406..7584)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Rhodococcus equi NBRC 101255 = C 7 RepID=U5DP54_COREQ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH76153.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical protein
NECEvent2014_4_5_scaffold_587_7
Gordonia aichiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7581..9545)
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Gordonia aichiensis NBRC 108223 RepID=L7KHP0_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC48129.1}; TaxID=1220583 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia aichiensis NBRC 108223.;"
ATP-dependent helicase
NECEvent2014_4_5_scaffold_587_8
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9542..12118)
DNA (2577bp) protein (859aa)
Putative DNA methyltransferase yeeA {ECO:0000313|EMBL:CCQ46035.1}; EC=2.1.1.- {ECO:0000313|EMBL:CCQ46035.1};; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacte
Uncharacterized protein n=1 Tax=Corynebacterium resistens (strain DSM 45100 / JCM 12819 / GTC 2026) RepID=F8E1U1_CORRG rbh
hypothetical protein
NECEvent2014_4_5_scaffold_587_9
Corynebacterium accolens, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12420..12854
DNA (435bp) protein (145aa)
Resolvase, N-terminal domain protein n=1 Tax=Corynebacterium accolens ATCC 49725 RepID=C0WGL8_9CORY
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEI15200.1}; TaxID=525260 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium ac
DNA recombinase
NECEvent2014_4_5_scaffold_587_trna_1
unknown

Not on your lists

comp(13027..13097)
DNA (71bp)
transferRNA
NECEvent2014_4_5_scaffold_587_10
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13626..14798
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0Z765_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EJZ88009.1}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
periplasmic solute binding family protein
NECEvent2014_4_5_scaffold_587_11
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14820..15617
DNA (798bp) protein (266aa)
ABC-type Mn2+/Zn2+ transporter, ATPase component n=2 Tax=Gardnerella vaginalis RepID=D6SXP5_GARVA rbh
ABC transporter ATP-binding protein
ABC-type Mn2+/Zn2+ transporter, ATPase component {ECO:0000313|EMBL:EFH27247.1}; TaxID=682147 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerell
NECEvent2014_4_5_scaffold_587_12
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15607..16548
DNA (942bp) protein (314aa)
ABC 3 transport family protein n=2 Tax=Gardnerella vaginalis RepID=S4HVC9_GARVA rbh
ABC 3 transport family protein {ECO:0000313|EMBL:EPI44365.1}; TaxID=1261071 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP85
iron chelate uptake ABC transporter permease
NECEvent2014_4_5_scaffold_587_13
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16545..17396
DNA (852bp) protein (284aa)
ABC-type Mn2+/Zn2+ transporter, permease component n=1 Tax=Gardnerella vaginalis AMD RepID=D6SXP7_GARVA rbh
ABC-type Mn2+/Zn2+ transporter, permease component {ECO:0000313|EMBL:EFH27249.1}; TaxID=682147 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnere
ABC transporter
NECEvent2014_4_5_scaffold_587_14
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17581..18633
DNA (1053bp) protein (351aa)
Zinc-binding dehydrogenase family protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J2J8Z2_9NOCA rbh
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:EJI96472.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
Zn-binding dehydrogenase
NECEvent2014_4_5_scaffold_587_15
Corynebacterium falsenii, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18768..19694)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Corynebacterium mastitidis RepID=UPI00037BE6E1
diacylglycerol kinase
Diacylglycerol kinase {ECO:0000313|EMBL:AHI02267.1}; TaxID=1451189 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium falsenii DSM 443
NECEvent2014_4_5_scaffold_587_16
Enterococcus sulfureus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19849..21507)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Enterococcus sulfureus ATCC 49903 RepID=S0L2Z4_9ENTE rbh
Uncharacterized protein {ECO:0000313|EMBL:EOT83078.1}; TaxID=1140003 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus sulfureus ATCC 49903
putative transport protein
NECEvent2014_4_5_scaffold_587_17
Campylobacter hyointestinalis, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21609..23150)
DNA (1542bp) protein (514aa)
Sodium-dependent transporter n=2 Tax=Campylobacter fetus RepID=A0RMW5_CAMFF rbh
Carboxylate transporter {ECO:0000313|EMBL:KEA43765.1}; TaxID=91352 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobact
sodium-dependent transporter (huNaDC-1)
Displaying 18 items

View Taxonomy