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NECEvent2014_4_5_scaffold_327_12

Organism: NECEvent2014_4_5_Actinomyces_59_217

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 9887..10600

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=2 Tax=Actinobacteria RepID=J2YUS9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 233.0
  • Bit_score: 418
  • Evalue 6.10e-114
  • rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 233.0
  • Bit_score: 418
  • Evalue 8.50e-114
50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 81.7
  • Coverage: 230.0
  • Bit_score: 374
  • Evalue 2.20e-101

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Taxonomy

Atopobium sp. ICM58 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGACAAAGCGCTCGAAGAGCTACCGGGCCGCCGCGGAGAAGATCCACGCCGGTGAGGTATACGAACCTCTTGAAGCCATGAAACTGGCAAAAGAAACCACTGTCACCAAGTTTGACGCCACCGTTGAGGTGATGTTCCGACTGGGTGTCGATCCCCGTAAAGCAGACCAGATGGTCCGCGGAACCGTTTCCCTGCCGCACGGCACTGGCAAGACCTCACGGGTCTTGGTCTTCGCTGTGGGCCCGCGCGCGCAGGAAGCGATCGACGCCGGAGCTGACGAGGTCGGCGGCGACGAACTGATTGAGAAGGTCCAGAAGGGCTACACCGATTTTGATGTGGCCGTCGCAACCCCTGACATGATGGGCAAGGTTGGCCGTCTGGGTCGCGTCCTCGGTCCTCGTGGCCTCATGCCGAACCCGAAGACCGGAACGGTCACGATGGAAGTTGGCAAGGCTGTCAAGGAGATCAAGGGTGGCCGTATCGAGTTCCGTGTGGACAAGCACGCGAACCTGGCGTTCATCATCGGCAAGGCATCCTTCACTGCTGAGCAGCTGACGGAAAACTACGCCGCTGCCCTCGATGAAGTCCTGCGTCTGAAGCCGTCCTCCTCCAAGGGTCGCTACATCACGAAGGCCACCGTTTCAACGACGATGGGCCCTGGCATCCCGTTGGATCCGACCAAGACGCGCGATCTGCTCGGCACTGACGACTGA
PROTEIN sequence
Length: 238
MTKRSKSYRAAAEKIHAGEVYEPLEAMKLAKETTVTKFDATVEVMFRLGVDPRKADQMVRGTVSLPHGTGKTSRVLVFAVGPRAQEAIDAGADEVGGDELIEKVQKGYTDFDVAVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMEVGKAVKEIKGGRIEFRVDKHANLAFIIGKASFTAEQLTENYAAALDEVLRLKPSSSKGRYITKATVSTTMGPGIPLDPTKTRDLLGTDD*