ggKbase home page

NECEvent2014_4_5_scaffold_327

Alias: 174_005_scaffold_327

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_327_1
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..233)
DNA (231bp) protein (77aa)
UPF0234 protein HMPREF9061_00650 n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PK52_9ACTO
UPF0234 protein HMPREF9061_00650 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxo
hypothetical protein
NECEvent2014_4_5_scaffold_327_trna_1
unknown

Not on your lists

371..452
DNA (82bp)
transferRNA
NECEvent2014_4_5_scaffold_327_trna_2
unknown

Not on your lists

569..641
DNA (73bp)
transferRNA
NECEvent2014_4_5_scaffold_327_trna_3
unknown

Not on your lists

675..748
DNA (74bp)
transferRNA
NECEvent2014_4_5_scaffold_327_2
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

804..2144
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VY81_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD31060.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.
major facilitator superfamily protein
NECEvent2014_4_5_scaffold_327_3
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2155..2712
DNA (558bp) protein (186aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B5E01B
NECEvent2014_4_5_scaffold_327_4
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2702..3094
DNA (393bp) protein (131aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JK17_9ACTO
NECEvent2014_4_5_scaffold_327_5
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3091..4071)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VUC1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD31058.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.
acetyltransferase and hydrolase with the alpha/beta hydrolase fold
NECEvent2014_4_5_scaffold_327_6
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4073..5173)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI0002FD7AF4 rbh
Adenosine deaminase {ECO:0000313|EMBL:KGE99860.1}; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S6-Spd3.;"
adenosine deaminase
NECEvent2014_4_5_scaffold_327_7
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5199..6038)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZDF2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD72375.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
hypothetical protein
NECEvent2014_4_5_scaffold_327_8
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6236..7450)
DNA (1215bp) protein (405aa)
Aspartate transaminase {ECO:0000313|EMBL:ENO18014.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ENO18014.1};; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" sourc
Aspartate transaminase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6WCQ8_9ACTO rbh
aminotransferase class I and II
NECEvent2014_4_5_scaffold_327_trna_4
unknown

Not on your lists

7655..7728
DNA (74bp)
transferRNA
NECEvent2014_4_5_scaffold_327_9
Actinomyces georgiae, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7770..8108
DNA (339bp) protein (113aa)
Protein translocase subunit SecE n=1 Tax=Actinomyces georgiae F0490 RepID=J0NIG2_9ACTO
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1125717 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces georgiae F049
Preprotein translocase subunit SecE
NECEvent2014_4_5_scaffold_327_10
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8209..9180
DNA (972bp) protein (324aa)
Transcription termination/antitermination protein NusG n=1 Tax=Actinomyces sp. oral taxon 877 str. F0543 RepID=U1SNT7_9ACTO rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1227264 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetac
transcription antitermination protein nusG
NECEvent2014_4_5_scaffold_327_11
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9294..9812
DNA (519bp) protein (173aa)
50S ribosomal protein L11 n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FVU9_ISOV2
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source
NECEvent2014_4_5_scaffold_327_12
Atopobium sp. ICM58, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


9887..10600
DNA (714bp) protein (238aa)
50S ribosomal protein L1 n=2 Tax=Actinobacteria RepID=J2YUS9_9ACTN rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;"
50S ribosomal protein L1
NECEvent2014_4_5_scaffold_327_13
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11611..12132
DNA (522bp) protein (174aa)
50S ribosomal protein L10 n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X2P8_9ACTO
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Ac
50S ribosomal protein L10
NECEvent2014_4_5_scaffold_327_14
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12235..12621
DNA (387bp) protein (129aa)
50S ribosomal protein L7/L12 n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B6C9C0
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 18
rplL; 50S ribosomal protein L7/L12
NECEvent2014_4_5_scaffold_327_15
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12877..13890
DNA (1014bp) protein (338aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=633147 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiace
dTDP-glucose 4,6-dehydratase n=1 Tax=Coriobacteriaceae RepID=UPI00034B26A9
NECEvent2014_4_5_scaffold_327_16
unknown

Not on your lists

comp(13856..14041)
DNA (186bp) protein (62aa)

This feature has no annotations

NECEvent2014_4_5_scaffold_327_17
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14349..15698
DNA (1350bp) protein (450aa)
Beta-lactamase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W4M7_9ACTO rbh
Beta-lactamase {ECO:0000313|EMBL:EEH66361.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
beta-lactamase
NECEvent2014_4_5_scaffold_327_18
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16368..19949
DNA (3582bp) protein (1194aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6W8I0_9ACTO rbh
DNA-directed RNA polymerase subunit beta
NECEvent2014_4_5_scaffold_327_19
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20100..24005
DNA (3906bp) protein (1302aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Actinomyces sp. ph3 RepID=UPI000302A139 rbh
DNA-directed RNA polymerase subunit beta'
Displaying 23 items

View Taxonomy