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NECEvent2014_4_5_scaffold_389

Alias: 174_005_scaffold_389

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_389_1
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..982
DNA (981bp) protein (327aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZYA5_9FIRM rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EPD79195.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillone
RND family efflux transporter MFP subunit
NECEvent2014_4_5_scaffold_389_2
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

979..4041
DNA (3063bp) protein (1021aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1LA54_9FIRM rbh
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EFL58505.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Ve
acriflavin resistance protein
NECEvent2014_4_5_scaffold_389_3
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4208..4768)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L5H6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFL56418.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-V
hypothetical protein
NECEvent2014_4_5_scaffold_389_4
Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4769..4942)
DNA (174bp) protein (58aa)
Uncharacterized protein n=3 Tax=Veillonella RepID=E1L5H5_9FIRM
NECEvent2014_4_5_scaffold_389_5
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5433..5750)
DNA (318bp) protein (106aa)
UPF0145 protein HMPREF9321_0805 n=4 Tax=Veillonella RepID=E1L4P2_9FIRM
UPF0145 protein HMPREF1504_0031 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. I
hypothetical protein
NECEvent2014_4_5_scaffold_389_6
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5925..7406)
DNA (1482bp) protein (494aa)
Amino acid permease n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LD49_9FIRM
Amino acid permease {ECO:0000313|EMBL:EFR60385.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 st
amino acid permease
NECEvent2014_4_5_scaffold_389_7
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7417..9318)
DNA (1902bp) protein (634aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=866778 species="Bacteria; Fi
DNA gyrase subunit B n=2 Tax=Veillonella atypica RepID=E1LBF9_9FIRM rbh
DNA gyrase subunit beta
NECEvent2014_4_5_scaffold_389_8
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9440..9688)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Veillonella sp. ACP1 RepID=J4JFW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJO49651.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
hypothetical protein
NECEvent2014_4_5_scaffold_389_9
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9850..10749)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Veillonella sp. HPA0037 RepID=S3A9W2_9FIRM rbh
PF05258 family protein {ECO:0000313|EMBL:EUB21700.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
hypothetical protein
NECEvent2014_4_5_scaffold_389_10
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10736..11836)
DNA (1101bp) protein (367aa)
DNA replication and repair protein RecF n=1 Tax=Veillonella sp. ACP1 RepID=J5AN76_9FIRM rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; V
DNA replication and repair protein RecF
NECEvent2014_4_5_scaffold_389_11
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11840..12070)
DNA (231bp) protein (77aa)
S4 domain protein n=1 Tax=Veillonella atypica ACS-049-V-Sch6 RepID=E1L4P8_9FIRM
S4 domain protein {ECO:0000313|EMBL:EFL56705.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-V-Sch6.
RNA-binding S4 domain-containing protein
NECEvent2014_4_5_scaffold_389_12
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12110..13231)
DNA (1122bp) protein (374aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1128111 species="Bacte
DNA polymerase III subunit beta n=2 Tax=Veillonella atypica RepID=E1L9P1_9FIRM rbh
DNA polymerase III subunit beta
NECEvent2014_4_5_scaffold_389_13
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13536..15119)
DNA (1584bp) protein (528aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Veillonella sp. HPA0037 RepID=S2ZRS1_9FIRM rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="V
chromosomal replication initiator protein DnaA
NECEvent2014_4_5_scaffold_389_14
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


16302..16436
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=14 Tax=Veillonella RepID=D1BQ76_VEIPT
50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
NECEvent2014_4_5_scaffold_389_15
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16516..16863
DNA (348bp) protein (116aa)
Ribonuclease P protein component n=4 Tax=Veillonella RepID=E1L4Q2_9FIRM
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
ribonuclease P protein component
NECEvent2014_4_5_scaffold_389_16
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16969..17235
DNA (267bp) protein (89aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Veillonella atypica KON RepID=L1PPB1_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Vei
hypothetical protein
NECEvent2014_4_5_scaffold_389_17
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17408..18064
DNA (657bp) protein (219aa)
Membrane protein insertase, YidC/Oxa1 family n=4 Tax=Veillonella RepID=E1L4Q3_9FIRM rbh
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:EFL56733.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillone
hypothetical protein
NECEvent2014_4_5_scaffold_389_18
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18073..18894
DNA (822bp) protein (274aa)
KH domain protein n=1 Tax=Veillonella sp. ACP1 RepID=J4QD11_9FIRM rbh
KH domain protein {ECO:0000313|EMBL:EJO49699.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
single-stranded nucleic acid binding R3H domain-containing protein
NECEvent2014_4_5_scaffold_389_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19120..19215
DNA (96bp) protein (32aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonella
tRNA modification GTPase MnmE n=1 Tax=Veillonella atypica KON RepID=L1PNY0_9FIRM
tRNA modification GTPase TrmE
Displaying 19 items

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