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NECEvent2014_4_5_scaffold_63

Alias: 174_005_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_63_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..766
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8I1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36055.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_5_scaffold_63_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(854..2284)
DNA (1431bp) protein (477aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=4 Tax=Clostridium butyricum RepID=B1QUE6_CLOBU rbh
adenylosuccinate lyase
NECEvent2014_4_5_scaffold_63_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2576..2794
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AI72_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36053.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_5_scaffold_63_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2868..3128)
DNA (261bp) protein (87aa)
Phosphocarrier protein HPr (Histidine-containing protein) n=3 Tax=Clostridium butyricum RepID=C4IJ96_CLOBU
HPr family phosphocarrier {ECO:0000313|EMBL:ENZ36052.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HPr family phosphocarrier
NECEvent2014_4_5_scaffold_63_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3243..3503)
DNA (261bp) protein (87aa)
Stage V sporulation protein S n=3 Tax=Clostridium butyricum RepID=C4IJ97_CLOBU
Stage V sporulation protein S {ECO:0000313|EMBL:EEP54676.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str.
spoVS; stage V sporulation protein S
NECEvent2014_4_5_scaffold_63_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3745..5316)
DNA (1572bp) protein (524aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1403941 species="Bacteria; Firmicutes; Clostrid
rny; ribonuclease Y (EC:3.1.-.-)
UPI0003D61F1A related cluster n=1 Tax=unknown RepID=UPI0003D61F1A rbh
NECEvent2014_4_5_scaffold_63_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5567..6646)
DNA (1080bp) protein (360aa)
Protein RecA n=3 Tax=Clostridium butyricum RepID=C4IJ99_CLOBU rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1403941 species="Bacteria; Firmicut
recA; recombinase A
NECEvent2014_4_5_scaffold_63_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6817..7407)
DNA (591bp) protein (197aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KJZ83013.1}; EC=2.7.8.5 {ECO:0000313|EMBL:KJZ83013.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Cl
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Clostridium butyricum RepID=C4IJA0_CLOBU rbh
NECEvent2014_4_5_scaffold_63_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7391..8785)
DNA (1395bp) protein (465aa)
rimO; ribosomal protein S12 methylthiotransferase RimO (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=3 Tax=Clostridium butyricum RepID=B1QUW4_CLOBU rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
NECEvent2014_4_5_scaffold_63_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8963..11392)
DNA (2430bp) protein (810aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z836_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ82955.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ftsK; DNA translocase FtsK
NECEvent2014_4_5_scaffold_63_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11577..12320)
DNA (744bp) protein (248aa)
Clp protease n=3 Tax=Clostridium butyricum RepID=B1QUW6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36045.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptidase S14, ClpP
NECEvent2014_4_5_scaffold_63_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12511..13677)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QUW7_CLOBU rbh
Putative iron-sulfur cluster binding protein YccM {ECO:0000313|EMBL:KJZ84555.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
putative peptidase
NECEvent2014_4_5_scaffold_63_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13798..15660)
DNA (1863bp) protein (621aa)
PTS system, beta-glucoside-specific IIABC component family protein (EC:2.7.1.69)
PTS system, beta-glucoside-specific IIABC component n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AI61_CLOBU rbh
PTS system, beta-glucoside-specific IIABC component {ECO:0000313|EMBL:ENZ36043.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_4_5_scaffold_63_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15805..16635)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AVG6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36042.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
licT; transcription antiterminator LicT
NECEvent2014_4_5_scaffold_63_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16968..17570)
DNA (603bp) protein (201aa)
Galactoside O-acetyltransferase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z831_CLOBU rbh
Galactoside O-acetyltransferase {ECO:0000313|EMBL:ENZ36041.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3
acetyltransferase
NECEvent2014_4_5_scaffold_63_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17634..18533)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8G8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36040.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative membrane protein
NECEvent2014_4_5_scaffold_63_17
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18704..18919)
DNA (216bp) protein (72aa)
competence protein TfoX n=1 Tax=Blautia producta RepID=UPI0003778A76
TfoX domain-containing protein
TfoX domain-containing protein {ECO:0000313|EMBL:AJQ25655.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JB
NECEvent2014_4_5_scaffold_63_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19018..19722)
DNA (705bp) protein (235aa)
Putative metal-dependent hydrolase n=2 Tax=Clostridium botulinum B RepID=B2TR72_CLOBB rbh
metal-dependent hydrolase
Putative metal-dependent hydrolase {ECO:0000313|EMBL:ACD23756.1}; Putative ribonuclease {ECO:0000313|EMBL:CDH92358.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
NECEvent2014_4_5_scaffold_63_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20009..21217)
DNA (1209bp) protein (403aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
dapG; aspartokinase 1 (EC:2.7.2.4)
Aspartokinase n=3 Tax=Clostridium butyricum RepID=B1QUX2_CLOBU rbh
NECEvent2014_4_5_scaffold_63_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21391..21672)
DNA (282bp) protein (94aa)
PRC-barrel domain protein n=3 Tax=Clostridium butyricum RepID=B1QUX3_CLOBU
YlmC/YmxH family sporulation protein {ECO:0000313|EMBL:ENZ36038.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
sporulation protein, YlmC/YmxH family
NECEvent2014_4_5_scaffold_63_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21884..23191)
DNA (1308bp) protein (436aa)
Peptidase M16 domain protein n=3 Tax=Clostridium butyricum RepID=B1QUX4_CLOBU rbh
Processing proteinase {ECO:0000313|EMBL:EEP53701.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E
peptidase M16 domain-containing protein
NECEvent2014_4_5_scaffold_63_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23337..25442)
DNA (2106bp) protein (702aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=632245
pnp; polyribonucleotide nucleotidyltransferase Pnp (EC:2.7.7.8) rbh
Polyribonucleotide nucleotidyltransferase n=3 Tax=Clostridium butyricum RepID=B1QUX5_CLOBU rbh
NECEvent2014_4_5_scaffold_63_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25544..25807)
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=4 Tax=Clostridium butyricum RepID=B1QUX6_CLOBU
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rpsO; 30S ribosomal protein S15
NECEvent2014_4_5_scaffold_63_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25925..26860)
DNA (936bp) protein (312aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=997898 species="Bacteria; Firmicutes;
ribC: riboflavin biosynthesis protein RibC (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATE6_CLOBU rbh
NECEvent2014_4_5_scaffold_63_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26876..27751)
DNA (876bp) protein (292aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
truB; tRNA pseudouridine synthase B (EC:5.4.99.25)
tRNA pseudouridine synthase B n=2 Tax=Clostridium butyricum RepID=M8JJ36_CLOBU rbh
NECEvent2014_4_5_scaffold_63_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27768..28745)
DNA (978bp) protein (326aa)
nrnA: bifunctional oligoribonuclease and PAP phosphatase NrnA (EC:3.1.-.- 3.1.3.7)
DHH subfamily 1 protein n=4 Tax=Clostridium butyricum RepID=B1QUX9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36032.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_5_scaffold_63_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28745..29098)
DNA (354bp) protein (118aa)
Ribosome-binding factor A n=3 Tax=Clostridium butyricum RepID=B1QUY0_CLOBU
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rbfA; ribosome-binding factor A
NECEvent2014_4_5_scaffold_63_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29112..31205)
DNA (2094bp) protein (698aa)
Translation initiation factor IF-2 n=3 Tax=Clostridium butyricum RepID=B1QUY1_CLOBU rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
infB; translation initiation factor IF-2
NECEvent2014_4_5_scaffold_63_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31221..31541)
DNA (321bp) protein (107aa)
Ribosomal protein, L7Ae family n=4 Tax=Clostridium butyricum RepID=B1QUY2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36028.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ribosomal protein L7Ae/L30e/S12e/gadd45
NECEvent2014_4_5_scaffold_63_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31534..31800)
DNA (267bp) protein (89aa)
YlxR n=2 Tax=Clostridium butyricum RepID=M8J8Q6_CLOBU
Nucleic-acid-binding protein implicated in transcription termination {ECO:0000313|EMBL:KJZ83010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
hypothetical protein
Displaying items 1-30 of 47 in total

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