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NECEvent2014_4_5_scaffold_248

Alias: 174_005_scaffold_248

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_248_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26..1186)
DNA (1161bp) protein (387aa)
UPI0003D5DD95 related cluster n=1 Tax=unknown RepID=UPI0003D5DD95 rbh
MFS transporter {ECO:0000313|EMBL:KHD14598.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
fucose permease
NECEvent2014_4_5_scaffold_248_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1295..2188
DNA (894bp) protein (298aa)
UPI0003D5D001 related cluster n=1 Tax=unknown RepID=UPI0003D5D001 rbh
Xylose operon regulatory protein {ECO:0000313|EMBL:KJZ84043.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
hypothetical protein
NECEvent2014_4_5_scaffold_248_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2284..4125)
DNA (1842bp) protein (614aa)
UPI0003D5B655 related cluster n=1 Tax=unknown RepID=UPI0003D5B655 rbh
ABC transporter {ECO:0000313|EMBL:KHD14595.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ABC transport system ATP-binding and permease protein
NECEvent2014_4_5_scaffold_248_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4130..5857)
DNA (1728bp) protein (576aa)
UPI0003D6893F related cluster n=1 Tax=unknown RepID=UPI0003D6893F rbh
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:KJZ84010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
ABC transport system ATP-binding and permease protein
NECEvent2014_4_5_scaffold_248_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5967..6767
DNA (801bp) protein (267aa)
UPI0003D6677A related cluster n=1 Tax=unknown RepID=UPI0003D6677A rbh
Transcriptional regulator, MerR family {ECO:0000313|EMBL:KJZ84048.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
bltR; transcriptional regulator
NECEvent2014_4_5_scaffold_248_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6801..8078)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A787_CLOBU rbh
Putative ABC transporter, permease protein {ECO:0000313|EMBL:KJZ84014.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
major facilitator superfamily transporter
NECEvent2014_4_5_scaffold_248_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8075..8869)
DNA (795bp) protein (265aa)
fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC (EC:3.6.3.34)
UPI0003A1ABBD related cluster n=1 Tax=unknown RepID=UPI0003A1ABBD rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ93310.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_4_5_scaffold_248_8
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8872..9879)
DNA (1008bp) protein (336aa)
UPI0003D626BE related cluster n=1 Tax=unknown RepID=UPI0003D626BE rbh
ABC-type Fe3+-siderophore transport system, permease 2 component {ECO:0000313|EMBL:KJZ87777.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
transport system permease
NECEvent2014_4_5_scaffold_248_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9879..10871)
DNA (993bp) protein (331aa)
UPI0003D61302 related cluster n=1 Tax=unknown RepID=UPI0003D61302 rbh
Ferrichrome ABC transporter permease {ECO:0000313|EMBL:KHD14589.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
putative membrane protein
NECEvent2014_4_5_scaffold_248_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10858..11808)
DNA (951bp) protein (317aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JF63_CLOBU rbh
Ferrichrome-binding periplasmic protein {ECO:0000313|EMBL:KJZ84023.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
putative secreted protein
NECEvent2014_4_5_scaffold_248_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12080..13084
DNA (1005bp) protein (335aa)
Helix-turn-helix domain-containing protein n=2 Tax=Clostridium butyricum RepID=M8JDU3_CLOBU rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KJZ84042.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
hypothetical protein
NECEvent2014_4_5_scaffold_248_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13143..14123)
DNA (981bp) protein (327aa)
L-fuco-beta-pyranose dehydrogenase {ECO:0000313|EMBL:KJZ84011.1}; EC=1.1.1.122 {ECO:0000313|EMBL:KJZ84011.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
UPI0003D5A2C5 related cluster n=1 Tax=unknown RepID=UPI0003D5A2C5 rbh
aldo/keto reductase
NECEvent2014_4_5_scaffold_248_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14392..15618)
DNA (1227bp) protein (409aa)
Serine/threonine transporter SstT n=2 Tax=Clostridium butyricum RepID=B1R0P2_CLOBU rbh
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1523154 species="Bacteria;
Na+/serine symporter
NECEvent2014_4_5_scaffold_248_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16190..18208)
DNA (2019bp) protein (673aa)
Probable potassium transport system protein kup n=2 Tax=Clostridium butyricum RepID=M8J4V4_CLOBU rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
potassium transporter
NECEvent2014_4_5_scaffold_248_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18517..20646)
DNA (2130bp) protein (710aa)
Surface protein PspA n=2 Tax=Clostridium butyricum RepID=M8JDT6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91843.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
glycoside hydrolase family 3 protein
NECEvent2014_4_5_scaffold_248_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20767..26853)
DNA (6087bp) protein (2029aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A794_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32303.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying 16 items

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