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NECEvent2014_4_5_scaffold_302

Alias: 174_005_scaffold_302

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_302_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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80..958
DNA (879bp) protein (293aa)
Transcriptional regulator, LysR family n=2 Tax=Clostridium butyricum RepID=B1QVT4_CLOBU rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KHD15022.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;
LysR family transcriptional regulator
NECEvent2014_4_5_scaffold_302_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1255..2262
DNA (1008bp) protein (336aa)
Membrane protein n=2 Tax=Clostridium butyricum RepID=B1QVT3_CLOBU rbh
Membrane protein {ECO:0000313|EMBL:EEP53718.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL526
membrane protein
NECEvent2014_4_5_scaffold_302_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2431..3624
DNA (1194bp) protein (398aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
isocitrate dehydrogenase (EC:1.1.1.42)
UPI0003D61092 related cluster n=1 Tax=unknown RepID=UPI0003D61092 rbh
NECEvent2014_4_5_scaffold_302_4
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3875..4714
DNA (840bp) protein (280aa)
Transcription antiterminator LicT n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPP1_CLOSA rbh
licT; transcription antiterminator LicT
Transcription antiterminator LicT {ECO:0000313|EMBL:AGX42779.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobuty
NECEvent2014_4_5_scaffold_302_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4909..6801
DNA (1893bp) protein (631aa)
PTS system, beta-glucoside-specific IIABC subunit n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LXA1_CLOB8
PTS sugar transporter subunit IIBC {ECO:0000313|EMBL:KHD15019.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
PTS system, beta-glucoside-specific IIABC subunit
NECEvent2014_4_5_scaffold_302_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6828..8243
DNA (1416bp) protein (472aa)
abgA1; 6-phospho-beta-glucosidase AbgA (EC:3.2.1.86)
Aryl-phospho-beta-D-glucosidase BglH n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFV7_9CLOT rbh
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KHD15018.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NECEvent2014_4_5_scaffold_302_trna_1
unknown

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8519..8590
DNA (72bp)
transferRNA
NECEvent2014_4_5_scaffold_302_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8863..9318
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QVT1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83207.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_5_scaffold_302_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9451..10677)
DNA (1227bp) protein (409aa)
Aminopeptidase {ECO:0000313|EMBL:EEP54840.1}; EC=3.4.11.- {ECO:0000313|EMBL:EEP54840.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
ampS; aminopeptidase AmpS (EC:3.4.11.-)
Aminopeptidase 2 n=2 Tax=Clostridium butyricum RepID=B1QVT0_CLOBU rbh
NECEvent2014_4_5_scaffold_302_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10885..13755
DNA (2871bp) protein (957aa)
polA; DNA polymerase I (EC:2.7.7.7)
UPI0003D62062 related cluster n=1 Tax=unknown RepID=UPI0003D62062 rbh
DNA polymerase I {ECO:0000313|EMBL:KHD15016.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NECEvent2014_4_5_scaffold_302_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13891..14490
DNA (600bp) protein (200aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1492 species="Bacteria; Firm
coaE; dephospho-CoA kinase CoaE (EC:2.7.1.24)
UPI0003D60E80 related cluster n=1 Tax=unknown RepID=UPI0003D60E80 rbh
NECEvent2014_4_5_scaffold_302_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14505..15128
DNA (624bp) protein (208aa)
Secreted protein n=4 Tax=Clostridium butyricum RepID=B1QVS7_CLOBU rbh
Lytic transglycosylase {ECO:0000313|EMBL:KHD15014.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
soluble lytic murein transglycosylase
NECEvent2014_4_5_scaffold_302_trna_2
unknown

Not on your lists

15247..15329
DNA (83bp)
transferRNA
NECEvent2014_4_5_scaffold_302_12
unknown

Not on your lists

15376..15525
DNA (150bp) protein (50aa)

This feature has no annotations

NECEvent2014_4_5_scaffold_302_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15589..16143
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7E4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35781.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_5_scaffold_302_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16137..16601
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K3P5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35782.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_5_scaffold_302_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16588..17217
DNA (630bp) protein (210aa)
Accessory protein regulator B superfamily n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBY0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35783.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
accessory gene regulator B superfamily
NECEvent2014_4_5_scaffold_302_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17249..17374
DNA (126bp) protein (42aa)
Cyclic lactone autoinducer peptide n=2 Tax=Clostridium butyricum RepID=R0ASR1_CLOBU
Putative lipoprotein {ECO:0000313|EMBL:KJZ83182.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative autoinducer prepeptide
NECEvent2014_4_5_scaffold_302_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17424..19100
DNA (1677bp) protein (559aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7V9_CLOBU rbh
Diguanylate cyclase {ECO:0000313|EMBL:KHD15009.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ggdef/hd domain protein
NECEvent2014_4_5_scaffold_302_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19396..19989
DNA (594bp) protein (198aa)
GMP synthase (Glutamine-hydrolyzing) domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7E6_CLOBU rbh
Anthranilate synthase subunit II {ECO:0000313|EMBL:KHD15008.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
anthranilate synthase component II
NECEvent2014_4_5_scaffold_302_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19982..21334
DNA (1353bp) protein (451aa)
aminodeoxychorismate synthase, subunit I (EC:2.6.1.85)
UPI0003D61BEE related cluster n=1 Tax=unknown RepID=UPI0003D61BEE rbh
Para-aminobenzoate synthase, component I {ECO:0000313|EMBL:ETI88535.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyr
NECEvent2014_4_5_scaffold_302_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21346..22071
DNA (726bp) protein (242aa)
UPI0003D6228C related cluster n=1 Tax=unknown RepID=UPI0003D6228C rbh
4-amino-4-deoxychorismate lyase {ECO:0000313|EMBL:KHD15006.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_4_5_scaffold_302_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22202..22924
DNA (723bp) protein (241aa)
UPI0003D5AB37 related cluster n=1 Tax=unknown RepID=UPI0003D5AB37 rbh
Cell wall-binding protein {ECO:0000313|EMBL:KHD15005.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
cell wall binding domain-containing protein
Displaying 23 items

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