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NECEvent2014_4_5_scaffold_328

Alias: 174_005_scaffold_328

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_328_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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109..1257
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXD6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32276.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
copper amine oxidase family protein,putative cell wall binding protein
NECEvent2014_4_5_scaffold_328_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1807..2784
DNA (978bp) protein (326aa)
PTS system, mannose-specific IIB component/PTS system, mannose-specific IIA component {ECO:0000313|EMBL:KJZ84034.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ84034.1};; TaxID=1523154 species="Bacteria; Firmic
Pts system mannose-specific eiiab component n=4 Tax=Clostridium butyricum RepID=B1R0Q8_CLOBU rbh
PTS system sorbose subfamily transporter subunit IIB
NECEvent2014_4_5_scaffold_328_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2818..3624
DNA (807bp) protein (269aa)
PTS system sorbose-specific iic component n=2 Tax=Clostridium butyricum RepID=M8J4Y9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32274.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system sorbose-specific transporter subunit IIC
NECEvent2014_4_5_scaffold_328_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3643..4554
DNA (912bp) protein (304aa)
IIDman n=4 Tax=Clostridium butyricum RepID=B1R0R0_CLOBU rbh
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:ENZ32273.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
PTS system mannose/fructose/sorbose family transporter subunit IID
NECEvent2014_4_5_scaffold_328_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4759..5133
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0R1_CLOBU
Putative regulator of the mannose operon, ManO {ECO:0000313|EMBL:KJZ84037.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
hypothetical protein
NECEvent2014_4_5_scaffold_328_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5410..7386
DNA (1977bp) protein (659aa)
Beta-lactamase {ECO:0000313|EMBL:KJZ84017.1}; EC=3.5.2.6 {ECO:0000313|EMBL:KJZ84017.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXD4_CLOBU rbh
beta-lactamase
NECEvent2014_4_5_scaffold_328_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7405..8184
DNA (780bp) protein (260aa)
Two-component system response regulator n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXY0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84032.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
regulatory protein VanR
NECEvent2014_4_5_scaffold_328_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8210..9268
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AHM7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84028.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
two-component sensor histidine kinase
NECEvent2014_4_5_scaffold_328_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9336..10232)
DNA (897bp) protein (299aa)
UPI0003D5F3D9 related cluster n=1 Tax=unknown RepID=UPI0003D5F3D9 rbh
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:KJZ84052.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
protein of unknown function DUF6 transmembrane
NECEvent2014_4_5_scaffold_328_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10376..11272
DNA (897bp) protein (299aa)
Helix-turn-helix domain-containing protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EP89_CLOPA rbh
Helix-turn-helix, AraC type {ECO:0000313|EMBL:KJZ92122.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
helix-turn-helix domain-containing protein
NECEvent2014_4_5_scaffold_328_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11399..12736)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AJH7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32267.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Histidine kinase, HAMP region:chemotaxis sensory transducer precursor
NECEvent2014_4_5_scaffold_328_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12985..13194
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9YXD0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32266.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
FeoA family protein
NECEvent2014_4_5_scaffold_328_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13229..13450
DNA (222bp) protein (74aa)
Ferrous iron transport protein A n=3 Tax=Clostridium butyricum RepID=C4IBY1_CLOBU
Ferrous iron transport protein A {ECO:0000313|EMBL:KJZ84157.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
hypothetical protein
NECEvent2014_4_5_scaffold_328_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13568..15718
DNA (2151bp) protein (717aa)
Ferrous iron transport protein B n=2 Tax=Clostridium butyricum RepID=M8J504_CLOBU rbh
Ferrous iron transporter B {ECO:0000313|EMBL:ENZ32264.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ferrous iron transport protein B
NECEvent2014_4_5_scaffold_328_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15945..16121
DNA (177bp) protein (59aa)
UPI0003D67CDB related cluster n=1 Tax=unknown RepID=UPI0003D67CDB
Uncharacterized protein {ECO:0000313|EMBL:KJZ91759.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_5_scaffold_328_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16450..17367
DNA (918bp) protein (306aa)
Ribokinase n=2 Tax=Clostridium butyricum RepID=M8JDR0_CLOBU rbh
Ribokinase {ECO:0000313|EMBL:ENZ32262.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rbsK; ribokinase
NECEvent2014_4_5_scaffold_328_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17384..17779
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1403941 species="Bacteria; Fir
D-ribose pyranase n=2 Tax=Clostridium butyricum RepID=M8JF31_CLOBU
D-ribose pyranase
NECEvent2014_4_5_scaffold_328_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17793..19301
DNA (1509bp) protein (503aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
Ribose import ATP-binding protein RbsA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J4S2_CLOBU rbh
ABC transporter related protein
NECEvent2014_4_5_scaffold_328_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19322..20254
DNA (933bp) protein (311aa)
Ribose transport system permease protein RbsC n=4 Tax=Clostridium butyricum RepID=B1R1N4_CLOBU rbh
Ribose ABC transport system, permease protein RbsC {ECO:0000313|EMBL:KJZ84139.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
rbsC; ribose ABC transporter permease
NECEvent2014_4_5_scaffold_328_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20381..21289
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A761_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32258.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ribose ABC transporter periplasmicD-ribose-binding protein
NECEvent2014_4_5_scaffold_328_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21341..21628
DNA (288bp) protein (96aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
fructose-6-phosphate aldolase, TalC/MipB family (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJG8_CLOBU
Displaying 21 items

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