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NECEvent2014_4_5_scaffold_338

Alias: 174_005_scaffold_338

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_338_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

160..594
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridium butyricum RepID=B1QZT4_CLOBU
Organic hydroperoxide resistance transcriptional regulator {ECO:0000313|EMBL:KJZ88996.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
ohrR; organic hydroperoxide resistance transcriptional regulator
NECEvent2014_4_5_scaffold_338_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1283..2629
DNA (1347bp) protein (449aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABF3_CLOBU rbh
Branched-chain amino acid transport system carrier protein {ECO:0000313|EMBL:KJZ88963.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
brnQ; branched-chain amino acid transport system II carrier protein
NECEvent2014_4_5_scaffold_338_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2685..3440
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANQ0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88982.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
cyclic nucleotide-binding domain protein
NECEvent2014_4_5_scaffold_338_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3571..4545
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IJS4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP53686.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_4_5_scaffold_338_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4595..5389)
DNA (795bp) protein (265aa)
Transcriptional regulator, DeoR family n=2 Tax=Clostridium butyricum RepID=C4IJS5_CLOBU rbh
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EEP54217.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
deoR; deoxyribose operon repressor
NECEvent2014_4_5_scaffold_338_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5684..6346
DNA (663bp) protein (221aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {E
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=4 Tax=Clostridium butyricum RepID=B1QZT0_CLOBU rbh
NECEvent2014_4_5_scaffold_338_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6524..7825
DNA (1302bp) protein (434aa)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:KJZ88962.1}; EC=2.4.2.2 {ECO:0000313|EMBL:KJZ88962.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=2 Tax=Clostridium butyricum RepID=M8JIE4_CLOBU rbh
NECEvent2014_4_5_scaffold_338_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7879..8850)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ANP5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33692.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Methyl-accepting chemotaxis protein
NECEvent2014_4_5_scaffold_338_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8881..9936)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3M4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD15902.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_4_5_scaffold_338_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10166..10801
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KBV8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ92379.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_5_scaffold_338_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11027..12952
DNA (1926bp) protein (642aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:000
Hydroxylamine reductase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ALS0_CLOBU rbh
hybrid cluster protein
NECEvent2014_4_5_scaffold_338_12
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13049..13858)
DNA (810bp) protein (270aa)
Putative ABC transporter, permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JIE1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86519.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
ABC transporter permease
NECEvent2014_4_5_scaffold_338_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13852..14559)
DNA (708bp) protein (236aa)
UPI0003D5ACFA related cluster n=1 Tax=unknown RepID=UPI0003D5ACFA rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETI91058.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
ABC transporter
NECEvent2014_4_5_scaffold_338_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14559..14927)
DNA (369bp) protein (123aa)
UPI0003D5C57D related cluster n=1 Tax=unknown RepID=UPI0003D5C57D
GntR-family transcriptional regulator {ECO:0000313|EMBL:ETI91059.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
yhcF; HTH-type transcriptional regulator YhcF
NECEvent2014_4_5_scaffold_338_15
unknown

Not on your lists

comp(14968..15267)
DNA (300bp) protein (100aa)

This feature has no annotations

NECEvent2014_4_5_scaffold_338_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15287..16210
DNA (924bp) protein (308aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
nadA; quinolinate synthase A (EC:2.5.1.72)
Quinolinate synthetase complex, A subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z1Z4_CLOBU rbh
NECEvent2014_4_5_scaffold_338_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16203..17510
DNA (1308bp) protein (436aa)
nadB; L-aspartate oxidase NadB (EC:1.4.3.16)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0ALR2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33684.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_5_scaffold_338_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17488..18327
DNA (840bp) protein (280aa)
Quinolinate phosphoribosyltransferase decarboxylating {ECO:0000313|EMBL:KJZ89063.1}; EC=2.4.2.19 {ECO:0000313|EMBL:KJZ89063.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=2 Tax=Clostridium butyricum RepID=M8JID7_CLOBU rbh
nicotinate-nucleotide pyrophosphorylase
NECEvent2014_4_5_scaffold_338_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18618..19952
DNA (1335bp) protein (445aa)
Pyridine nucleotide-disulfide oxidoreductase NADH dehydrogenase {ECO:0000313|EMBL:KJZ88989.1}; EC=1.6.99.3 {ECO:0000313|EMBL:KJZ88989.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clos
coenzyme A disulfide reductase (EC:1.6.99.3)
NADH oxidase (Noxase) n=2 Tax=Clostridium butyricum RepID=M8JGU7_CLOBU rbh
NECEvent2014_4_5_scaffold_338_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20141..20470
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K3L6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33681.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_4_5_scaffold_338_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20781..21215
DNA (435bp) protein (145aa)
UspA domain protein n=4 Tax=Clostridium butyricum RepID=C4IJU0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33680.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
UspA domain-containing protein
Displaying 21 items

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