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NECEvent2014_4_5_scaffold_348

Alias: 174_005_scaffold_348

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_348_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..814
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J594_CLOBU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ31830.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_4_5_scaffold_348_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1068..1997)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGC4_CLOBU rbh
Putative DNA polymerase III epsilon chain {ECO:0000313|EMBL:KJZ86696.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
DNA polymerase III epsilon subunit-like 3'-5' exonuclease
NECEvent2014_4_5_scaffold_348_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2311..3552)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A5U9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31828.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative voltage gated chloride channel family
NECEvent2014_4_5_scaffold_348_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3770..5356)
DNA (1587bp) protein (529aa)
Alpha/beta superfamily hydrolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JE77_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96461.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
alpha/beta superfamily hydrolase
NECEvent2014_4_5_scaffold_348_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5600..7018)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JFI3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ86688.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_4_5_scaffold_348_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7015..7704)
DNA (690bp) protein (230aa)
Transcriptional regulatory protein ResD n=4 Tax=Clostridium butyricum RepID=B1R0U9_CLOBU rbh
Two-component response regulator {ECO:0000313|EMBL:KJZ86703.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
transcriptional regulatory protein ResD
NECEvent2014_4_5_scaffold_348_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7845..9791)
DNA (1947bp) protein (649aa)
Molybdopterin oxidoreductase n=2 Tax=Clostridium butyricum RepID=M8K905_CLOBU rbh
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:KJZ86680.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
molybdopterin oxidoreductase Fe4S4 domain protein
NECEvent2014_4_5_scaffold_348_8
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9957..10673
DNA (717bp) protein (239aa)
UPI0003D68AB7 related cluster n=1 Tax=unknown RepID=UPI0003D68AB7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88389.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
response regulator
NECEvent2014_4_5_scaffold_348_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10676..12097
DNA (1422bp) protein (474aa)
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Clostridium butyricum RepID=M8JE81_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96446.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
integral membrane sensor signal transduction histidine kinase
NECEvent2014_4_5_scaffold_348_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12197..12757
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R0U5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96448.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_4_5_scaffold_348_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12864..13697)
DNA (834bp) protein (278aa)
yvgN; Glyoxal reductase (EC:1.1.1.-)
Oxidoreductase, aldo/keto reductase family n=2 Tax=Clostridium butyricum RepID=M8J5A1_CLOBU rbh
Oxidoreductase of aldo/keto reductase family, subgroup 1 {ECO:0000313|EMBL:KJZ89431.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
NECEvent2014_4_5_scaffold_348_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13708..14388)
DNA (681bp) protein (227aa)
Ribose-5-phosphate isomerase {ECO:0000256|SAAS:SAAS00087684}; EC=5.3.1.6 {ECO:0000256|SAAS:SAAS00087684};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
Ribose 5-phosphate isomerase A n=2 Tax=Clostridium butyricum RepID=B1R0U3_CLOBU rbh
ribose 5-phosphate isomerase
NECEvent2014_4_5_scaffold_348_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14456..15310)
DNA (855bp) protein (285aa)
Transcriptional regulator, RpiR family n=4 Tax=Clostridium butyricum RepID=B1R0U2_CLOBU rbh
Sialic acid utilization regulator, RpiR family {ECO:0000313|EMBL:KJZ89435.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
transcriptional regulator, RpiR family
NECEvent2014_4_5_scaffold_348_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15535..17268)
DNA (1734bp) protein (578aa)
Methyl-accepting chemotaxis sensory transducer n=2 Tax=Clostridium butyricum RepID=B1R0U1_CLOBU rbh
Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) {ECO:0000313|EMBL:KJZ89432.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
methyl-accepting chemotaxis sensory transducer
NECEvent2014_4_5_scaffold_348_15
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17689..18735)
DNA (1047bp) protein (349aa)
Anaerobic sulfite reductase subunit C {ECO:0000313|EMBL:KJZ92934.1}; EC=1.8.1.- {ECO:0000313|EMBL:KJZ92934.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Sulfite reductase, subunit C n=4 Tax=Clostridium butyricum RepID=B1R0U0_CLOBU rbh
asrC; anaerobic sulfite reductase subunit C
NECEvent2014_4_5_scaffold_348_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18748..19539)
DNA (792bp) protein (264aa)
Sulfite reductase, subunit B n=2 Tax=Clostridium butyricum RepID=B1R0T9_CLOBU rbh
Anaerobic sulfite reductase subunit A {ECO:0000313|EMBL:KJZ96459.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN
asrB; sulfite reductase, subunit B
NECEvent2014_4_5_scaffold_348_17
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19542..20573)
DNA (1032bp) protein (344aa)
Sulfite reductase, subunit A n=2 Tax=Clostridium butyricum RepID=M8K913_CLOBU rbh
Anaerobic sulfite reductase subunit A {ECO:0000313|EMBL:KJZ92935.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN
anaerobic sulfite reductase subunit A
Displaying 17 items

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