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NECEvent2014_4_5_scaffold_496

Alias: 174_005_scaffold_496

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_496_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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153..1040
DNA (888bp) protein (296aa)
ABC transporter, permease protein n=4 Tax=Clostridium butyricum RepID=B1QXT8_CLOBU rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EEP55326.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4
yurN; hypothetical protein
NECEvent2014_4_5_scaffold_496_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1053..1940
DNA (888bp) protein (296aa)
Permease protein n=4 Tax=Clostridium butyricum RepID=B1QXT9_CLOBU rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:KJZ88020.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
ABC transporter
NECEvent2014_4_5_scaffold_496_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1951..4110
DNA (2160bp) protein (720aa)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSB9_CLOBU rbh
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase {ECO:0000313|EMBL:ENZ30315.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
hypothetical protein
NECEvent2014_4_5_scaffold_496_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4137..4292
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YRU0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88021.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_5_scaffold_496_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4369..5715
DNA (1347bp) protein (449aa)
ABC transporter, substrate-binding protein n=2 Tax=Clostridium butyricum RepID=M8JFI5_CLOBU rbh
Carbohydrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ30317.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
ABC transporter
NECEvent2014_4_5_scaffold_496_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5779..6735
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1G5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30318.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
BadF/BadG/BcrA/BcrD family ATPase
NECEvent2014_4_5_scaffold_496_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6770..7909)
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1523154 species
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAE8_CLOBU rbh
NECEvent2014_4_5_scaffold_496_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8192..8689
DNA (498bp) protein (166aa)
PTS system mannose/fructose/sorbose family transporter subunit IIB (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=2 Tax=Clostridium butyricum RepID=M8J6M0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88018.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_4_5_scaffold_496_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8721..9491
DNA (771bp) protein (257aa)
PTS system, N-acetylgalactosamine-specific IIC component {ECO:0000313|EMBL:KJZ88016.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ88016.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridial
PTS system sorbose-specific IIC component n=2 Tax=Clostridium butyricum RepID=M8JGU3_CLOBU rbh
PTS system sorbose-specific transporter subunit IIC
NECEvent2014_4_5_scaffold_496_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9478..10326
DNA (849bp) protein (283aa)
N-acetylgalactosamine permease iid component n=2 Tax=Clostridium butyricum RepID=M8JFI0_CLOBU rbh
PTS system, mannose-specific IID component {ECO:0000313|EMBL:KJZ88014.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
PTS system mannose/fructose/sorbose family transporter subunit IID
NECEvent2014_4_5_scaffold_496_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10462..11208
DNA (747bp) protein (249aa)
Transcriptional regulator, GntR family n=5 Tax=Clostridium butyricum RepID=M8K263_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30323.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
GntR family transcriptional regulator
NECEvent2014_4_5_scaffold_496_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11310..12470
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AC25_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30324.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative phosphosugar isomerase
NECEvent2014_4_5_scaffold_496_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12489..12920
DNA (432bp) protein (144aa)
Pts system mannose-specific eiiab component n=3 Tax=Clostridium butyricum RepID=B1QXU9_CLOBU
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:ENZ30325.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
PTS system fructose IIA component
NECEvent2014_4_5_scaffold_496_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12966..13820
DNA (855bp) protein (285aa)
gatY; D-tagatose-1,6-bisphosphate aldolase subunit GatY (EC:4.1.2.40)
Class II aldolase, tagatose bisphosphate family n=2 Tax=Clostridium butyricum RepID=M8JGU0_CLOBU rbh
Tagatose bisphosphate family class II aldolase {ECO:0000313|EMBL:ENZ30326.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_4_5_scaffold_496_trna_1
unknown

Not on your lists

14288..14361
DNA (74bp)
transferRNA
NECEvent2014_4_5_scaffold_496_trna_2
unknown

Not on your lists

14385..14455
DNA (71bp)
transferRNA
NECEvent2014_4_5_scaffold_496_trna_3
unknown

Not on your lists

14728..14798
DNA (71bp)
transferRNA
NECEvent2014_4_5_scaffold_496_trna_4
unknown

Not on your lists

15175..15248
DNA (74bp)
transferRNA
Displaying 18 items

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