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NECEvent2014_4_5_Clostridium_butyricum_28_20

NECEvent2014_4_5_Clostridium_butyricum_29_21
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium butyricum  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 201-227 of 227 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_345 174_005_scaffold_345
Species: Clostridium butyricum (53.33%)
30 20781 bp 29.72 25.30 93.92
NECEvent2014_4_5_scaffold_332 174_005_scaffold_332
Genus: Clostridium (71.43%)
21 21511 bp 29.05 25.32 88.29
NECEvent2014_4_5_scaffold_384 174_005_scaffold_384
Species: Clostridium butyricum (88.89%)
18 19289 bp 29.29 25.55 87.95
NECEvent2014_4_5_scaffold_275 174_005_scaffold_275
Species: Clostridium sp. IBUN125C (57.14%)
21 24738 bp 29.17 25.56 88.42
NECEvent2014_4_5_scaffold_3135 174_005_scaffold_3135
Species: Clostridium butyricum (100%)
3 1525 bp 31.93 26.07 99.15
NECEvent2014_4_5_scaffold_512 174_005_scaffold_512
Genus: Clostridium (66.67%)
15 14860 bp 30.33 26.42 86.56
NECEvent2014_4_5_scaffold_794 174_005_scaffold_794
Species: Clostridium butyricum (83.33%)
6 10035 bp 29.31 26.59 89.15
NECEvent2014_4_5_scaffold_282 174_005_scaffold_282
Genus: Clostridium (97.56%)
41 39013 bp 30.73 26.75 88.30
NECEvent2014_4_5_scaffold_1464 174_005_scaffold_1464
Genus: Clostridium (100%)
5 4540 bp 29.87 26.86 83.85
NECEvent2014_4_5_scaffold_258 174_005_scaffold_258
Genus: Clostridium (97.62%)
42 26278 bp 32.26 27.01 84.74
NECEvent2014_4_5_scaffold_786 174_005_scaffold_786
Species: Clostridium butyricum (80%)
5 10134 bp 29.92 27.01 85.58
NECEvent2014_4_5_scaffold_3451 174_005_scaffold_3451
Species: Clostridium botulinum (100%)
1 1343 bp 29.04 27.70 88.24
NECEvent2014_4_5_scaffold_2873 174_005_scaffold_2873
Species: Clostridium butyricum (100%)
2 1755 bp 34.59 27.78 94.87
NECEvent2014_4_5_scaffold_1287 174_005_scaffold_1287
Species: Clostridium sp. IBUN125C (50%)
4 5393 bp 29.11 29.45 71.70
NECEvent2014_4_5_scaffold_3712 174_005_scaffold_3712
Species: Clostridium butyricum (100%)
4 1211 bp 32.37 34.93 101.07
NECEvent2014_4_5_scaffold_3846 174_005_scaffold_3846
Species: Clostridium sp. IBUN22A (100%)
1 1151 bp 30.93 37.40 99.83
NECEvent2014_4_5_scaffold_1927 174_005_scaffold_1927
Genus: Clostridium (87.5%)
8 3072 bp 27.64 37.70 88.87
NECEvent2014_4_5_scaffold_3410 174_005_scaffold_3410
Species: Clostridium butyricum (100%)
3 1365 bp 28.94 38.02 86.15
NECEvent2014_4_5_scaffold_3062 174_005_scaffold_3062
Species: Clostridium butyricum (100%)
4 1574 bp 27.76 44.12 99.68
NECEvent2014_4_5_scaffold_1724 174_005_scaffold_1724
Species: Clostridium butyricum (75%)
4 4356 bp 28.44 46.56 93.11
NECEvent2014_4_5_scaffold_1713 174_005_scaffold_1713
Species: Clostridium butyricum (100%)
2 3674 bp 28.28 47.73 77.08
NECEvent2014_4_5_scaffold_1179 174_005_scaffold_1179
Species: Clostridium butyricum (90%)
10 7984 bp 29.81 55.16 89.99
NECEvent2014_4_5_scaffold_3884 174_005_scaffold_3884
Species: Clostridium butyricum (100%)
1 1138 bp 32.69 61.42 99.65
NECEvent2014_4_5_scaffold_3175 174_005_scaffold_3175
Species: Clostridium butyricum (50%)
2 1504 bp 36.50 63.23 99.93
NECEvent2014_4_5_scaffold_4216 174_005_scaffold_4216
Species: Clostridium butyricum (100%)
1 1019 bp 31.50 79.64 99.80
NECEvent2014_4_5_scaffold_2993 174_005_scaffold_2993
Species: Clostridium sp. IBUN22A (50%)
4 1629 bp 28.36 94.11 75.14
NECEvent2014_4_5_scaffold_3621 174_005_scaffold_3621
Species: Clostridium butyricum (100%)
1 1257 bp 27.45 169.81 99.76
Displaying items 201-227 of 227 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.