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NECEvent2014_4_5_Clostridium_butyricum_28_20

NECEvent2014_4_5_Clostridium_butyricum_29_21
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium butyricum  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 151-200 of 227 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_27 174_005_scaffold_27
Species: Clostridium butyricum (59.68%)
62 75043 bp 28.64 21.99 88.46
NECEvent2014_4_5_scaffold_63 174_005_scaffold_63
Species: Clostridium butyricum (57.45%)
47 54014 bp 30.36 21.99 89.07
NECEvent2014_4_5_scaffold_335 174_005_scaffold_335
Genus: Clostridium (100%)
17 21364 bp 28.08 22.06 80.90
NECEvent2014_4_5_scaffold_224 174_005_scaffold_224
Species: Clostridium butyricum (78.26%)
23 29164 bp 30.63 22.09 92.02
NECEvent2014_4_5_scaffold_101 174_005_scaffold_101
Species: Clostridium butyricum (61.54%)
39 44488 bp 28.74 22.11 85.72
NECEvent2014_4_5_scaffold_739 174_005_scaffold_739
Species: Clostridium butyricum (66.67%)
6 10757 bp 31.17 22.17 89.69
NECEvent2014_4_5_scaffold_975 174_005_scaffold_975
Genus: Clostridium (77.78%)
9 7919 bp 27.78 22.24 68.91
NECEvent2014_4_5_scaffold_569 174_005_scaffold_569
Species: Clostridium butyricum (92.86%)
14 13576 bp 30.10 22.25 94.47
NECEvent2014_4_5_scaffold_1154 174_005_scaffold_1154
Genus: Clostridium (83.33%)
6 6180 bp 28.62 22.43 89.95
NECEvent2014_4_5_scaffold_380 174_005_scaffold_380
Genus: Clostridium (100%)
18 19476 bp 29.60 22.44 84.06
NECEvent2014_4_5_scaffold_865 174_005_scaffold_865
Species: Clostridium butyricum (50%)
10 9044 bp 29.43 22.46 85.12
NECEvent2014_4_5_scaffold_678 174_005_scaffold_678
Species: Clostridium butyricum (50%)
14 11580 bp 29.75 22.56 90.78
NECEvent2014_4_5_scaffold_126 174_005_scaffold_126
Species: Clostridium butyricum (60.71%)
28 40135 bp 28.96 22.77 90.42
NECEvent2014_4_5_scaffold_571 174_005_scaffold_571
Species: Clostridium butyricum (66.67%)
18 13556 bp 30.56 22.84 90.91
NECEvent2014_4_5_scaffold_112 174_005_scaffold_112
Genus: Clostridium (95.74%)
47 42180 bp 29.12 22.84 81.13
NECEvent2014_4_5_scaffold_2975 174_005_scaffold_2975
Species: Clostridium butyricum (100%)
3 1648 bp 29.13 22.85 99.94
NECEvent2014_4_5_scaffold_545 174_005_scaffold_545
Species: Clostridium butyricum (50%)
8 14220 bp 28.13 22.87 77.28
NECEvent2014_4_5_scaffold_32 174_005_scaffold_32
Genus: Clostridium (90%)
70 71518 bp 28.55 22.89 85.73
NECEvent2014_4_5_scaffold_896 174_005_scaffold_896
Species: Clostridium butyricum (75%)
4 8727 bp 29.29 22.98 49.26
NECEvent2014_4_5_scaffold_57 174_005_scaffold_57
Species: Clostridium butyricum (55.81%)
43 56054 bp 28.98 22.99 86.84
NECEvent2014_4_5_scaffold_225 174_005_scaffold_225
Genus: Clostridium (88.24%)
34 28940 bp 27.44 22.99 80.61
NECEvent2014_4_5_scaffold_47 174_005_scaffold_47
Genus: Clostridium (94.55%)
55 63667 bp 29.12 23.19 90.57
NECEvent2014_4_5_scaffold_2804 174_005_scaffold_2804
Species: Clostridium sp. IBUN13A (100%)
1 1810 bp 30.17 23.20 93.31
NECEvent2014_4_5_scaffold_98 174_005_scaffold_98
Species: Clostridium butyricum (71.79%)
39 45405 bp 29.29 23.24 85.09
NECEvent2014_4_5_scaffold_177 174_005_scaffold_177
Genus: Clostridium (78.13%)
32 33896 bp 28.07 23.28 86.83
NECEvent2014_4_5_scaffold_3932 174_005_scaffold_3932
Species: Clostridium butyricum (50%)
2 1118 bp 25.40 23.35 74.87
NECEvent2014_4_5_scaffold_491 174_005_scaffold_491
Species: Clostridium butyricum (57.14%)
7 15620 bp 28.53 23.35 91.50
NECEvent2014_4_5_scaffold_434 174_005_scaffold_434
Species: Clostridium butyricum (70%)
10 17465 bp 28.65 23.41 79.91
NECEvent2014_4_5_scaffold_93 174_005_scaffold_93
Genus: Clostridium (80%)
40 46731 bp 28.82 23.55 84.85
NECEvent2014_4_5_scaffold_394 174_005_scaffold_394
Species: Clostridium butyricum (56%)
25 19027 bp 28.10 23.56 80.57
NECEvent2014_4_5_scaffold_88 174_005_scaffold_88
Species: Clostridium butyricum (50%)
46 47869 bp 29.78 23.65 84.74
NECEvent2014_4_5_scaffold_364 174_005_scaffold_364
Genus: Clostridium (100%)
22 20113 bp 29.45 23.94 81.90
NECEvent2014_4_5_scaffold_411 174_005_scaffold_411
Genus: Clostridium (76.19%)
21 18552 bp 28.97 24.03 88.14
NECEvent2014_4_5_scaffold_310 174_005_scaffold_310
Genus: Clostridium (70%)
20 22789 bp 28.41 24.08 79.12
NECEvent2014_4_5_scaffold_1001 174_005_scaffold_1001
Genus: Clostridium (88.89%)
9 7669 bp 29.10 24.12 79.10
NECEvent2014_4_5_scaffold_135 174_005_scaffold_135
Genus: Clostridium (100%)
32 39802 bp 29.63 24.17 90.04
NECEvent2014_4_5_scaffold_317 174_005_scaffold_317
Species: Clostridium butyricum (82.86%)
35 22282 bp 29.61 24.28 90.17
NECEvent2014_4_5_scaffold_132 174_005_scaffold_132
Genus: Clostridium (88.57%)
35 39046 bp 29.19 24.28 84.52
NECEvent2014_4_5_scaffold_782 174_005_scaffold_782
Species: Clostridium butyricum (50%)
6 10165 bp 28.64 24.29 81.22
NECEvent2014_4_5_scaffold_2875 174_005_scaffold_2875
Species: Clostridium butyricum (50%)
2 1754 bp 35.35 24.29 94.93
NECEvent2014_4_5_scaffold_1031 174_005_scaffold_1031
Genus: Clostridium (100%)
7 7325 bp 30.03 24.37 76.79
NECEvent2014_4_5_scaffold_881 174_005_scaffold_881
Genus: Clostridium (80%)
10 8932 bp 30.43 24.42 85.51
NECEvent2014_4_5_scaffold_367 174_005_scaffold_367
Species: Clostridium butyricum (50%)
16 19960 bp 29.18 24.48 89.49
NECEvent2014_4_5_scaffold_686 174_005_scaffold_686
Species: Clostridium butyricum (55.56%)
9 11488 bp 29.13 24.53 86.62
NECEvent2014_4_5_scaffold_2880 174_005_scaffold_2880
Species: Clostridium butyricum (100%)
1 1748 bp 30.72 24.71 71.22
NECEvent2014_4_5_scaffold_630 174_005_scaffold_630
Species: Clostridium sp. IBUN125C (53.85%)
13 12492 bp 28.33 24.89 88.98
NECEvent2014_4_5_scaffold_21 174_005_scaffold_21
Species: Clostridium butyricum (50.68%)
73 78187 bp 29.56 24.92 87.95
NECEvent2014_4_5_scaffold_406 174_005_scaffold_406
Species: Clostridium butyricum (54.55%)
11 18735 bp 30.60 25.00 83.54
NECEvent2014_4_5_scaffold_496 174_005_scaffold_496
Genus: Clostridium (77.78%)
18 15269 bp 29.08 25.00 86.05
NECEvent2014_4_5_scaffold_3123 174_005_scaffold_3123
Species: Clostridium butyricum (100%)
5 1534 bp 28.03 25.03 90.55
Displaying items 151-200 of 227 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.