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NECEvent2014_4_5_scaffold_215

Alias: 174_005_scaffold_215

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_215_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1092
DNA (1092bp) protein (364aa)
Stage II sporulation protein P n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C9W9_9CLOT rbh
Stage II sporulation protein P {ECO:0000313|EMBL:EOR26122.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AA
stage II sporulation protein P
NECEvent2014_4_5_scaffold_215_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1156..1812
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98836.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_5_scaffold_215_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1903..3741
DNA (1839bp) protein (613aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
lepA; elongation factor 4 (EC:3.6.5.n1)
Elongation factor 4 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAS1_9CLOT rbh
NECEvent2014_4_5_scaffold_215_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3909..4817)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHF3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98834.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
patatin-like phospholipase
NECEvent2014_4_5_scaffold_215_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4950..5231
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98833.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_5_scaffold_215_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5641..6774
DNA (1134bp) protein (378aa)
coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V4_9CLOT rbh
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EEH98832.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_4_5_scaffold_215_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6959..7990
DNA (1032bp) protein (344aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFX2_9CLOT rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
hrcA; heat-inducible transcription repressor HrcA
NECEvent2014_4_5_scaffold_215_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8009..8653
DNA (645bp) protein (215aa)
Protein GrpE n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAR6_9CLOT rbh
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales
grpE; heat shock protein GrpE
NECEvent2014_4_5_scaffold_215_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8705..10555
DNA (1851bp) protein (617aa)
Chaperone protein DnaK n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C9S3_9CLOT rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; chaperone protein DnaK
NECEvent2014_4_5_scaffold_215_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10647..11774
DNA (1128bp) protein (376aa)
Chaperone dnaJ n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8B1_9CLOT rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
dnaJ; chaperone protein DnaJ
NECEvent2014_4_5_scaffold_215_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12076..13626
DNA (1551bp) protein (517aa)
Ferredoxin-nitrite reductase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C9Z8_9CLOT rbh
Ferredoxin-nitrite reductase {ECO:0000313|EMBL:EOR26189.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1
ferredoxin-nitrite reductase
NECEvent2014_4_5_scaffold_215_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13771..14268
DNA (498bp) protein (166aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4N6_9CLOT
peroxiredoxin
NECEvent2014_4_5_scaffold_215_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14442..15383
DNA (942bp) protein (314aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG42_9CLOT rbh
prmA; ribosomal protein L11 methyltransferase
NECEvent2014_4_5_scaffold_215_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15403..16158
DNA (756bp) protein (252aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; C
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.193)
RsmE family RNA methyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHE9_9CLOT rbh
NECEvent2014_4_5_scaffold_215_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16158..17462
DNA (1305bp) protein (435aa)
mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB (EC:2.-.-.-)
MiaB/RimO family radical SAM methylthiotransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8A9_9CLOT rbh
MiaB/RimO family radical SAM methylthiotransferase {ECO:0000313|EMBL:EEH98823.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_4_5_scaffold_215_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17625..17966
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98822.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
NECEvent2014_4_5_scaffold_215_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18085..18261
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=7 Tax=Clostridium RepID=L1Q425_9CLOT
ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_4_5_scaffold_215_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18714..18992
DNA (279bp) protein (93aa)
Sporulation protein YqfC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG02_9CLOT
Sporulation protein YqfC {ECO:0000313|EMBL:EEH98820.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
yqfC; sporulation protein YqfC
NECEvent2014_4_5_scaffold_215_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18994..20133
DNA (1140bp) protein (380aa)
Sporulation protein YqfD n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHE8_9CLOT rbh
Sporulation protein YqfD {ECO:0000313|EMBL:EEH98819.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
yqfD; sporulation protein YqfD
NECEvent2014_4_5_scaffold_215_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20153..22234
DNA (2082bp) protein (694aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8A8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98818.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
membrane protein containing HD superfamily hydrolase domain
NECEvent2014_4_5_scaffold_215_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22465..22965
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=457396 species="Bacteria; Fi
Metalloprotein, YbeY/UPF0054family n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3U8_9CLOT
putative metalloprotease
NECEvent2014_4_5_scaffold_215_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23190..23891
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4N2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98816.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
diacylglycerol kinase/PAP2 family protein
NECEvent2014_4_5_scaffold_215_23
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24013..24903
DNA (891bp) protein (297aa)
GTPase Era n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG30_9CLOT rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
era; GTPase Era
NECEvent2014_4_5_scaffold_215_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24908..25651
DNA (744bp) protein (248aa)
DNA repair protein RecO n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAY2_9CLOT rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1202534 species="Bacteria; Firmicutes; Clostr
recO; DNA repair protein RecO
NECEvent2014_4_5_scaffold_215_25
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25665..26273
DNA (609bp) protein (203aa)
Ubiquitin-associated domain-containing protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C9Y2_9CLOT
Ubiquitin-associated domain-containing protein {ECO:0000313|EMBL:EOR26174.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
ubiquitin-associated domain-containing protein
NECEvent2014_4_5_scaffold_215_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26469..27107
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3U7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98812.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_5_scaffold_215_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27186..29816
DNA (2631bp) protein (877aa)
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4N0_9CLOT rbh
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EEH98811.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_4_5_scaffold_215_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30143..30391
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25478.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Displaying 28 items

View Taxonomy