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NECEvent2014_4_5_scaffold_290

Alias: 174_005_scaffold_290

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_290_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

204..851
DNA (648bp) protein (216aa)
Hemolysin III family channel protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8U4_9CLOT rbh
Hemolysin III family channel protein {ECO:0000313|EMBL:EEH99335.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43
channel , hemolysin III family protein
NECEvent2014_4_5_scaffold_290_2
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1070..1825)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26480.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_4_5_scaffold_290_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1825..2700)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H539_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99333.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter ATP-binding protein
NECEvent2014_4_5_scaffold_290_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2704..3066)
DNA (363bp) protein (121aa)
GntR family transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAZ3_9CLOT
GntR family transcriptional regulator {ECO:0000313|EMBL:EOR26482.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagof
GntR family transcriptional regulator
NECEvent2014_4_5_scaffold_290_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3358..4668)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HI82_9CLOT rbh
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sodium:neurotransmitter symporter family protein
NECEvent2014_4_5_scaffold_290_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5145..6755
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8U2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99330.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter family protein
NECEvent2014_4_5_scaffold_290_7
Paenisporosarcina sp. HGH0030, Paenisporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6847..8625)
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2Y8E7_9BACL rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD53727.1}; TaxID=1078085 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Paenisporosarcina.;" source="Paenisporosarcina sp. HGH0030.;"
ABC transporter
NECEvent2014_4_5_scaffold_290_8
Paenisporosarcina sp. HGH0030, Paenisporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8625..10568)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2XNZ1_9BACL rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD53726.1}; TaxID=1078085 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Paenisporosarcina.;" source="Paenisporosarcina sp. HGH0030.;"
ABC transporter
NECEvent2014_4_5_scaffold_290_9
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10570..11247)
DNA (678bp) protein (226aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHR0_CLOPH rbh
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABX42345.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394
NECEvent2014_4_5_scaffold_290_10
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11252..12604)
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHR1_CLOPH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42346.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans
NECEvent2014_4_5_scaffold_290_11
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12750..13439
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VDM062 RepID=J8PHV1_BACCE rbh
Uncharacterized protein {ECO:0000313|EMBL:EJS10697.1}; TaxID=1053250 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VDM062.
two component transcriptional regulator
NECEvent2014_4_5_scaffold_290_12
Paenisporosarcina sp. HGH0030, Paenisporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13420..14571
DNA (1152bp) protein (384aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1078085 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Paenisporosarcina.;" s
Uncharacterized protein n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2YPU3_9BACL rbh
integral membrane sensor signal transduction histidine kinase
NECEvent2014_4_5_scaffold_290_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14639..15097)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4E8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99329.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spermine/spermidine acetyltransferase
NECEvent2014_4_5_scaffold_290_14
unknown

Not on your lists

comp(15213..15458)
DNA (246bp) protein (82aa)

This feature has no annotations

NECEvent2014_4_5_scaffold_290_15
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15520..16056)
DNA (537bp) protein (179aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KAQ9_CLOPA
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGK96725.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
NECEvent2014_4_5_scaffold_290_16
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16143..16607)
DNA (465bp) protein (155aa)
NUDIX hydrolase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SVN4_CLOC7
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADL53095.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 3529
NECEvent2014_4_5_scaffold_290_17
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16621..17079)
DNA (459bp) protein (153aa)
Acetyltransferase n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K051_CLOPA
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGK96467.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
NECEvent2014_4_5_scaffold_290_18
unknown

Not on your lists

comp(17161..17448)
DNA (288bp) protein (96aa)

This feature has no annotations

NECEvent2014_4_5_scaffold_290_19
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17583..18905)
DNA (1323bp) protein (441aa)
MATE efflux family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBU0_9CLOT rbh
MATE efflux family protein {ECO:0000313|EMBL:EOR26485.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;
MATE efflux family protein
NECEvent2014_4_5_scaffold_290_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19105..19932)
DNA (828bp) protein (276aa)
Cof-like hydrolase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGU4_9CLOT rbh
Cof-like hydrolase {ECO:0000313|EMBL:EEH99327.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cof family hydrolase
NECEvent2014_4_5_scaffold_290_21
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20079..20321
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NNK7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK30441.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
NECEvent2014_4_5_scaffold_290_22
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20328..21149
DNA (822bp) protein (274aa)
Pentapeptide repeat protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q2Z9_9CLOT rbh
Pentapeptide repeat protein {ECO:0000313|EMBL:EET84130.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.
hypothetical protein
NECEvent2014_4_5_scaffold_290_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21234..22958)
DNA (1725bp) protein (575aa)
hydA; iron hydrogenase (EC:1.12.7.2)
Iron hydrogenase 1 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HI76_9CLOT rbh
Iron hydrogenase 1 {ECO:0000313|EMBL:EEH99326.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_4_5_scaffold_290_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23110..23436)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8U0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99325.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_5_scaffold_290_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23781..24005
DNA (225bp) protein (75aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00093350};; TaxID=883064
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RS83_CLOPF
Displaying 25 items

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