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NECEvent2014_4_5_scaffold_293

Alias: 174_005_scaffold_293

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_293_1
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..344)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y126_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01854.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_4_5_scaffold_293_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(450..842)
DNA (393bp) protein (131aa)
aldoketomutase n=1 Tax=Clostridium botulinum RepID=UPI00035E2F11
Aldoketomutase {ECO:0000313|EMBL:KIL07387.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
glyoxalase/bleomycin resistance protein/dioxygenase
NECEvent2014_4_5_scaffold_293_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(839..1600)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF46_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98460.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_5_scaffold_293_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1799..2419)
DNA (621bp) protein (207aa)
YteA family sporulation protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGZ7_9CLOT rbh
YteA family sporulation protein {ECO:0000313|EMBL:EEH98459.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;
transcriptional regulator, TraR/DksA family
NECEvent2014_4_5_scaffold_293_5
Vibrio sinaloensis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2894..3883)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Vibrio sinaloensis DSM 21326 RepID=E8M5I5_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:EGA70778.1}; TaxID=945550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sinaloensis DSM 21326.;"
hypothetical protein
NECEvent2014_4_5_scaffold_293_6
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4063..4464)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CN30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI91929.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
NECEvent2014_4_5_scaffold_293_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4594..5859
DNA (1266bp) protein (422aa)
Na+/H+ antiporter NhaA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3Q5_9CLOT
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
Na+/H+ antiporter NhaA
NECEvent2014_4_5_scaffold_293_trna_1
unknown

Not on your lists

6184..6256
DNA (73bp)
transferRNA
NECEvent2014_4_5_scaffold_293_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6387..7067
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C115_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR20886.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_4_5_scaffold_293_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7238..8794)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4B7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98466.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter ATP-binding protein
NECEvent2014_4_5_scaffold_293_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8939..9496)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3G4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98467.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_5_scaffold_293_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9608..10657)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7Z4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98468.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
bacterial extracellular solute-binding family protein
NECEvent2014_4_5_scaffold_293_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10884..11177)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98469.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_5_scaffold_293_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11270..12646
DNA (1377bp) protein (459aa)
Putative DNA modification/repair radical SAM protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF60_9CLOT rbh
Putative DNA modification/repair radical SAM protein {ECO:0000313|EMBL:EEH98470.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
radical SAM domain-containing protein
NECEvent2014_4_5_scaffold_293_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12658..13395
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4B8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98471.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative DNA metabolism protein
NECEvent2014_4_5_scaffold_293_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13824..14201)
DNA (378bp) protein (126aa)
Putative endoribonuclease L-PSP n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3G6_9CLOT
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EEH98472.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;
putative endoribonuclease L-PSP
NECEvent2014_4_5_scaffold_293_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14367..15389
DNA (1023bp) protein (341aa)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
ilvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7Z5_9CLOT rbh
NECEvent2014_4_5_scaffold_293_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15582..16382)
DNA (801bp) protein (267aa)
Formate/nitrite transporter n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C102_9CLOT rbh
Formate/nitrite transporter {ECO:0000313|EMBL:EOR20871.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.
nitrite transporter
NECEvent2014_4_5_scaffold_293_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16477..17268)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4B9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98476.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sirohydrochlorin cobaltochelatase
NECEvent2014_4_5_scaffold_293_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17279..18580)
DNA (1302bp) protein (434aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3G8_9CLOT rbh
NECEvent2014_4_5_scaffold_293_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18562..19530)
DNA (969bp) protein (323aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7Z7_9CLOT rbh
NECEvent2014_4_5_scaffold_293_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19523..21019)
DNA (1497bp) protein (499aa)
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH02_9CLOT rbh
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EEH98479.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_
hemX; uroporphyrinogen-III methyltransferase/synthase
NECEvent2014_4_5_scaffold_293_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21022..21900)
DNA (879bp) protein (293aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF72_9CLOT rbh
NECEvent2014_4_5_scaffold_293_23
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21911..22579)
DNA (669bp) protein (223aa)
Precorrin-2 dehydrogenase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C107_9CLOT rbh
Precorrin-2 dehydrogenase {ECO:0000313|EMBL:EOR20876.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
precorrin-2 dehydrogenase
NECEvent2014_4_5_scaffold_293_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22537..23742)
DNA (1206bp) protein (402aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3H0_9CLOT rbh
Displaying 25 items

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