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NECEvent2014_4_5_scaffold_376

Alias: 174_005_scaffold_376

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_376_1
Bacillus sp. SJS, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..994)
DNA (993bp) protein (331aa)
Glycosyl transferase 2 family protein n=1 Tax=Clostridium sp. CAG:793 RepID=R5NSZ1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:KEZ56703.1}; TaxID=1423321 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SJS.;"
glycosyl transferase 2
NECEvent2014_4_5_scaffold_376_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1021..1923)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74753.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM
hypothetical protein
NECEvent2014_4_5_scaffold_376_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1939..2673)
DNA (735bp) protein (245aa)
bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family (EC:2.4.1.187 2.4.1.-)
Bacterial polymer biosynthesis protein, WecB/TagA/CpsF family n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG36_9CLOT rbh
N-acetyl-mannosamine transferase {ECO:0000313|EMBL:CEK31589.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sord
NECEvent2014_4_5_scaffold_376_4
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2689..3621)
DNA (933bp) protein (311aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI
GDP-L-fucose synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENK2_9CLOT
NAD-dependent epimerase/dehydratase rbh
NECEvent2014_4_5_scaffold_376_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3637..4695)
DNA (1059bp) protein (353aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1202534 species="Bacte
GDP-mannose 4,6-dehydratase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGW7_9CLOT
GDP-mannose 4,6-dehydratase
NECEvent2014_4_5_scaffold_376_6
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4721..5767)
DNA (1047bp) protein (349aa)
algA: alginate biosynthesis protein AlgA (EC:5.3.1.8 2.7.7.13)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VXN4_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK45880.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermen
NECEvent2014_4_5_scaffold_376_7
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5898..6545)
DNA (648bp) protein (216aa)
capsular exopolysaccharide family (EC:2.7.10.2)
Capsular exopolysaccharide family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFX0_9CLOT
Capsular exopolysaccharide family protein {ECO:0000313|EMBL:EOR28244.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sart
NECEvent2014_4_5_scaffold_376_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6555..7232)
DNA (678bp) protein (226aa)
Capsular polysaccharide biosynthsis protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGU9_9CLOT
Capsular polysaccharide biosynthsis protein {ECO:0000313|EMBL:EOR28245.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sa
capsular polysaccharide biosynthsis protein
NECEvent2014_4_5_scaffold_376_9
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(7665..8801)
DNA (1137bp) protein (379aa)
TDP-4-oxo-6-deoxy-D-glucose transaminase n=1 Tax=Fusobacterium nucleatum subsp. animalis D11 RepID=D6BIX5_FUSNU rbh
TDP-4-oxo-6-deoxy-D-glucose transaminase {ECO:0000313|EMBL:EFD82122.2}; TaxID=556264 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatu
TDP-4-oxo-6-deoxy-D-glucose transaminase
NECEvent2014_4_5_scaffold_376_10
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9087..10298)
DNA (1212bp) protein (404aa)
Putative carbamoyl-phosphate-synthetase n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XWG4_9FIRM rbh
Putative carbamoyl-phosphate-synthetase {ECO:0000313|EMBL:CDA13226.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;"
putative carbamoyl-phosphate-synthetase
NECEvent2014_4_5_scaffold_376_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10811..11521)
DNA (711bp) protein (237aa)
capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
Putative tyrosine-protein phosphatase CapC n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CM28_9CLOT
Putative tyrosine-protein phosphatase CapC {ECO:0000313|EMBL:EOR28246.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sar
NECEvent2014_4_5_scaffold_376_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11778..13130)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BSS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20194.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_4_5_scaffold_376_13
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13415..14449)
DNA (1035bp) protein (345aa)
Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K700_CLOPA
protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation
Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation {ECO:0000313|EMBL:AGK95415.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
NECEvent2014_4_5_scaffold_376_14
unknown

Not on your lists

comp(14613..14855)
DNA (243bp) protein (81aa)

This feature has no annotations

NECEvent2014_4_5_scaffold_376_15
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14868..15272)
DNA (405bp) protein (135aa)
MBOAT family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XA00_9CLOT
Alginate regulatory protein {ECO:0000313|EMBL:KHS56677.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter o
Predicted membrane protein involved in D-alanine export
NECEvent2014_4_5_scaffold_376_16
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15546..15797)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N9A7_9CLOT
Alginate O-acetyltransferase AlgI family protein {ECO:0000313|EMBL:CCZ52115.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental sampl
membrane bound O-acyl transferase MBOAT family protein
NECEvent2014_4_5_scaffold_376_17
unknown

Not on your lists

comp(16677..16910)
DNA (234bp) protein (78aa)

This feature has no annotations

NECEvent2014_4_5_scaffold_376_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16940..17488)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96752.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative HRDC domain protein
NECEvent2014_4_5_scaffold_376_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17512..17742)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1U5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96752.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_4_5_scaffold_376_20
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17767..19107)
DNA (1341bp) protein (447aa)
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGY1_9CLOT rbh
UDP-glucose/GDP-mannose dehydrogenase {ECO:0000313|EMBL:EOR28270.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagof
UDP-glucose/GDP-mannose dehydrogenase
NECEvent2014_4_5_scaffold_376_21
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19109..19648)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6YSZ4_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC19803.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
acyltransferase
Displaying 21 items

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