ggKbase home page

NECEvent2014_4_5_scaffold_388

Alias: 174_005_scaffold_388

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_388_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..498)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H408_9CLOT
UPF0348 protein CSBG_01801 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
nucleotidyltransferase
NECEvent2014_4_5_scaffold_388_2
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

678..1715
DNA (1038bp) protein (346aa)
eutD; phosphotransacetylase (EC:2.3.1.8)
Phosphotransacetylase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CJT5_9CLOT rbh
Phosphotransacetylase {ECO:0000313|EMBL:EOR27421.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_4_5_scaffold_388_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1742..2938
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia;
ackA; acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGL9_9CLOT rbh
NECEvent2014_4_5_scaffold_388_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3131..3640
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7N3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98172.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_5_scaffold_388_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3643..3828
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=2 Tax=Clostridium RepID=R9CDT1_9CLOT
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU
rpmF; 50S ribosomal protein L32
NECEvent2014_4_5_scaffold_388_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3883..4884
DNA (1002bp) protein (334aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
plsX; phosphate acyltransferase PlsX (EC:2.3.1.n2)
Phosphate acyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H406_9CLOT rbh
NECEvent2014_4_5_scaffold_388_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4961..5191
DNA (231bp) protein (77aa)
Acyl carrier protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEP2_9CLOT
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridial
acpP; acyl carrier protein
NECEvent2014_4_5_scaffold_388_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5322..6023
DNA (702bp) protein (234aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
rnc; ribonuclease 3 (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGL6_9CLOT rbh
NECEvent2014_4_5_scaffold_388_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6013..7047
DNA (1035bp) protein (345aa)
Radical SAM domain-containing protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDI4_9CLOT rbh
Radical SAM domain-containing protein {ECO:0000313|EMBL:EOR27414.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagof
radical SAM domain-containing protein
NECEvent2014_4_5_scaffold_388_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7235..10798
DNA (3564bp) protein (1188aa)
Chromosome segregation protein SMC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H339_9CLOT rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43
smc; chromosome segregation protein SMC
NECEvent2014_4_5_scaffold_388_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10809..11729
DNA (921bp) protein (307aa)
Signal recognition particle receptor FtsY n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDS7_9CLOT rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridial
ftsY; signal recognition particle-docking protein FtsY
NECEvent2014_4_5_scaffold_388_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11994..12323
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEN9_9CLOT
UPF0122 protein CSBG_01790 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative DNA-binding protein
NECEvent2014_4_5_scaffold_388_13
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12343..13695
DNA (1353bp) protein (451aa)
Signal recognition particle protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CJS7_9CLOT rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
ffh; signal recognition particle protein Ffh
NECEvent2014_4_5_scaffold_388_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13730..13975
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=2 Tax=Clostridium RepID=R9CEI1_9CLOT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rpsP; 30S ribosomal protein S16
NECEvent2014_4_5_scaffold_388_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14022..14261
DNA (240bp) protein (80aa)
UPF0109 protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H337_9CLOT
UPF0109 protein CSBG_01787 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
KH domain-containing RNA-binding protein
NECEvent2014_4_5_scaffold_388_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14593..15090
DNA (498bp) protein (166aa)
16S rRNA processing protein RimM n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H401_9CLOT rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
rimM; 16S rRNA processing protein RimM
NECEvent2014_4_5_scaffold_388_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15080..15793
DNA (714bp) protein (238aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
trmD; tRNA (guanine(37)-N(1))-methyltransferase (EC:2.1.1.228)
tRNA (Guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEN7_9CLOT rbh
NECEvent2014_4_5_scaffold_388_18
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15907..16257
DNA (351bp) protein (117aa)
50S ribosomal protein L19 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CJS4_9CLOT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rplS; 50S ribosomal protein L19
NECEvent2014_4_5_scaffold_388_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16376..17254
DNA (879bp) protein (293aa)
Ribosome biogenesis GTP-binding protein YlqF n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7M9_9CLOT rbh
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rbgA; ribosomal biogenesis GTPase
NECEvent2014_4_5_scaffold_388_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17256..18068
DNA (813bp) protein (271aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H334_9CLOT rbh
NECEvent2014_4_5_scaffold_388_21
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18075..18446)
DNA (372bp) protein (124aa)
UPF0102 protein A500_04651 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDR8_9CLOT
UPF0102 protein A500_04651 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AA
endonuclease
NECEvent2014_4_5_scaffold_388_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18562..19224
DNA (663bp) protein (221aa)
Mg chelatase-like protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEN6_9CLOT
Mg chelatase-like protein {ECO:0000313|EMBL:EEH98154.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Mg chelatase-like protein
Displaying 22 items

View Taxonomy