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NECEvent2014_4_5_scaffold_421

Alias: 174_005_scaffold_421

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_421_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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54..284
DNA (231bp) protein (77aa)
atpE; F0F1 ATP synthase subunit C (EC:3.6.3.14)
ATP synthase subunit C n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8Q8_9CLOT
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_4_5_scaffold_421_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

317..805
DNA (489bp) protein (163aa)
atpF; F0F1 ATP synthase subunit B (EC:3.6.3.14)
ATP synthase F0, B subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4A5_9CLOT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
NECEvent2014_4_5_scaffold_421_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

805..1344
DNA (540bp) protein (180aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H520_9CLOT rbh
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
NECEvent2014_4_5_scaffold_421_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1355..2878
DNA (1524bp) protein (508aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGM7_9CLOT rbh
NECEvent2014_4_5_scaffold_421_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3056..3907
DNA (852bp) protein (284aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase F1, gamma subunit n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHV8_9CLOT rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=4573
NECEvent2014_4_5_scaffold_421_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3923..5314
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
atpD; F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C250_9CLOT rbh
NECEvent2014_4_5_scaffold_421_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5326..5730
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4A3_9CLOT
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
ATP synthase F1, epsilon subunit
NECEvent2014_4_5_scaffold_421_8
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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6078..6749
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R7I1_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CDC44853.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
NECEvent2014_4_5_scaffold_421_9
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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6771..7778
DNA (1008bp) protein (336aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N8C0_9FIRM rbh
signal transduction histidine kinase
NECEvent2014_4_5_scaffold_421_10
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7887..8654
DNA (768bp) protein (256aa)
ABC transporter ATP-binding protein n=1 Tax=Dorea sp. 5-2 RepID=R9N9B8_9FIRM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOS79561.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
ABC transporter rbh
NECEvent2014_4_5_scaffold_421_11
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8647..10629
DNA (1983bp) protein (661aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AND4_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EMZ29656.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;
lipoprotein release ABC transporter permease
NECEvent2014_4_5_scaffold_421_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11104..11721
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H519_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99231.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_5_scaffold_421_13
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11743..13002
DNA (1260bp) protein (420aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BW76_9CLOT rbh
NECEvent2014_4_5_scaffold_421_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13173..14195
DNA (1023bp) protein (341aa)
Stage II sporulation protein D n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHV3_9CLOT rbh
Stage II sporulation protein D {ECO:0000313|EMBL:EEH99229.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spoIIID1; stage II sporulation protein D
NECEvent2014_4_5_scaffold_421_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14624..15352
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8Q5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99228.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
metalloendopeptidase-like membrane protein
NECEvent2014_4_5_scaffold_421_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15429..15680
DNA (252bp) protein (84aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4A1_9CLOT
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EEH99227.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
spoIIID; sporulation transcriptional regulator spoiiid
NECEvent2014_4_5_scaffold_421_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15832..16866
DNA (1035bp) protein (345aa)
MreB/Mrl family cell shape determining protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H518_9CLOT rbh
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:EEH99226.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
rod shape-determining protein Mbl
NECEvent2014_4_5_scaffold_421_18
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17004..17540)
DNA (537bp) protein (179aa)
Putative sporulation protein YyaC n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BW71_9CLOT
Putative sporulation protein YyaC {ECO:0000313|EMBL:EOR21298.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme
yyaC; putative sporulation protein YyaC
NECEvent2014_4_5_scaffold_421_trna_1
unknown

Not on your lists

17831..17912
DNA (82bp)
transferRNA
Displaying 19 items

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