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NECEvent2014_4_5_scaffold_546

Alias: 174_005_scaffold_546

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_546_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..667)
DNA (666bp) protein (222aa)
FolC protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3C3_9CLOT
FolC protein {ECO:0000313|EMBL:EEH97559.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
FolC bifunctional protein
NECEvent2014_4_5_scaffold_546_2
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(669..1457)
DNA (789bp) protein (263aa)
RimK domain-containing protein ATP-grasp n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CIB1_9CLOT rbh
RimK domain-containing protein ATP-grasp {ECO:0000313|EMBL:EOR26901.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sarta
RimK family alpha-L-glutamate ligase
NECEvent2014_4_5_scaffold_546_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1451..2347)
DNA (897bp) protein (299aa)
RimK family alpha-L-glutamate ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFR0_9CLOT rbh
RimK family alpha-L-glutamate ligase {ECO:0000313|EMBL:EEH97557.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43
RimK family alpha-L-glutamate ligase
NECEvent2014_4_5_scaffold_546_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2460..2891
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2J1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97555.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_5_scaffold_546_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3154..5796)
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valine--tRNA ligase (EC:6.1.1.9)
Valyl-tRNA synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3C1_9CLOT rbh
NECEvent2014_4_5_scaffold_546_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6347..6475)
DNA (129bp) protein (43aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=B1BV94_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14381.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_4_5_scaffold_546_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6529..7473)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFQ7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97552.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
pfkB carbohydrate kinase family protein
NECEvent2014_4_5_scaffold_546_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7687..8052
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BSX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR19795.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
tetratricopeptide TPR_1 repeat-containing protein
NECEvent2014_4_5_scaffold_546_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8363..9433)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2J0_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97550.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
transglutaminase
NECEvent2014_4_5_scaffold_546_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9451..10086)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3B9_9CLOT rbh
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
recX; recombination regulator RecX
NECEvent2014_4_5_scaffold_546_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10103..11341)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDN7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97548.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
peptidase M16 domain-containing protein
NECEvent2014_4_5_scaffold_546_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11736..12410
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFQ5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97547.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_5_scaffold_546_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12394..13908
DNA (1515bp) protein (505aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H754_9CLOT rbh
two-component sensor histidine kinase
Displaying 13 items

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