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NECEvent2014_4_5_scaffold_583

Alias: 174_005_scaffold_583

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_583_trna_3
unknown

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comp(1..58)
DNA (58bp)
transferRNA
NECEvent2014_4_5_scaffold_583_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(324..1829)
DNA (1506bp) protein (502aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysyl-tRNA synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIH2_9CLOT rbh
NECEvent2014_4_5_scaffold_583_2
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1843..2325)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBF0_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1202534 species="Bacteri
greA; transcription elongation factor GreA domain protein
NECEvent2014_4_5_scaffold_583_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2534..3514)
DNA (981bp) protein (327aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
NifR3 family putative TIM-barrel protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4M1_9CLOT rbh
TIM-barrel , nifR3 family protein
NECEvent2014_4_5_scaffold_583_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3521..4300)
DNA (780bp) protein (260aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H569_9CLOT rbh
NECEvent2014_4_5_scaffold_583_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4433..6103)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=457396 spe
Formate-tetrahydrofolate ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH12_9CLOT rbh
formate--tetrahydrofolate ligase family protein
NECEvent2014_4_5_scaffold_583_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6344..8146)
DNA (1803bp) protein (601aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBF7_9CLOT rbh
hflB; ATP-dependent metallopeptidase HflB family protein
NECEvent2014_4_5_scaffold_583_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8205..8744)
DNA (540bp) protein (180aa)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8Y7_9CLOT rbh
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EEH99486.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_
hypoxanthine phosphoribosyltransferase
NECEvent2014_4_5_scaffold_583_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8748..10136)
DNA (1389bp) protein (463aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthetase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4L9_9CLOT rbh
tilS; tRNA(Ile)-lysidine synthetase
NECEvent2014_4_5_scaffold_583_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10316..12694)
DNA (2379bp) protein (793aa)
spoIIE; stage II sporulation protein E (EC:3.1.3.16)
Stage II sporulation protein E n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H568_9CLOT rbh
Stage II sporulation protein E {ECO:0000313|EMBL:EEH99484.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_4_5_scaffold_583_trna_2
unknown

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comp(13212..13295)
DNA (84bp)
transferRNA
NECEvent2014_4_5_scaffold_583_trna_1
unknown

Not on your lists

comp(13302..13375)
DNA (74bp)
transferRNA
Displaying 12 items

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