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NECEvent2014_4_5_Clostridium_7_2_43FAA-rel_28_9

NECEvent2014_4_5_Clostridium_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 51-100 of 473 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_221 174_005_scaffold_221
Species: Clostridium sp. 7_2_43FAA (66.67%)
36 29278 bp 29.44 11.28 87.87
NECEvent2014_4_5_scaffold_449 174_005_scaffold_449
Species: Clostridium sp. 7_2_43FAA (76.92%)
13 16825 bp 29.53 11.19 89.30
NECEvent2014_4_5_scaffold_3868 174_005_scaffold_3868
Species: Clostridium sp. IBUN13A (100%)
1 1143 bp 24.41 11.15 66.93
NECEvent2014_4_5_scaffold_1057 174_005_scaffold_1057
Genus: Clostridium (80%)
5 7069 bp 30.16 11.12 92.30
NECEvent2014_4_5_scaffold_476 174_005_scaffold_476
Order: Clostridiales (92.31%)
13 16031 bp 31.03 11.12 94.49
NECEvent2014_4_5_scaffold_1021 174_005_scaffold_1021
Genus: Clostridium (87.5%)
8 7441 bp 28.02 11.11 87.04
NECEvent2014_4_5_scaffold_669 174_005_scaffold_669
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 11765 bp 31.19 11.09 87.44
NECEvent2014_4_5_scaffold_809 174_005_scaffold_809
Genus: Clostridium (100%)
10 9820 bp 29.16 11.03 86.43
NECEvent2014_4_5_scaffold_866 174_005_scaffold_866
Species: Clostridium sp. 7_2_43FAA (72.73%)
11 9039 bp 30.14 11.02 91.70
NECEvent2014_4_5_scaffold_1333 174_005_scaffold_1333
Species: Clostridium sp. 7_2_43FAA (100%)
3 5126 bp 27.45 11.00 94.69
NECEvent2014_4_5_scaffold_1089 174_005_scaffold_1089
Species: Clostridium sp. 7_2_43FAA (50%)
8 6781 bp 29.24 10.99 90.03
NECEvent2014_4_5_scaffold_479 174_005_scaffold_479
Order: Clostridiales (91.67%)
12 15987 bp 29.64 10.99 91.18
NECEvent2014_4_5_scaffold_1868 174_005_scaffold_1868
Species: Clostridium sp. 7_2_43FAA (100%)
2 3244 bp 30.89 10.96 73.34
NECEvent2014_4_5_scaffold_772 174_005_scaffold_772
Species: Clostridium sp. 7_2_43FAA (75%)
4 10320 bp 27.65 10.94 92.47
NECEvent2014_4_5_scaffold_136 174_005_scaffold_136
Genus: Clostridium (84.85%)
33 38457 bp 29.52 10.91 87.01
NECEvent2014_4_5_scaffold_353 174_005_scaffold_353
Species: Clostridium sartagoforme (73.91%)
23 20374 bp 28.93 10.90 90.34
NECEvent2014_4_5_scaffold_1195 174_005_scaffold_1195
Genus: Clostridium (62.5%)
8 5929 bp 29.21 10.88 88.40
NECEvent2014_4_5_scaffold_1298 174_005_scaffold_1298
Genus: Clostridium (55.56%)
9 5328 bp 30.11 10.87 80.39
NECEvent2014_4_5_scaffold_862 174_005_scaffold_862
Species: Clostridium sp. CAG:265 (50%)
2 9118 bp 29.68 10.86 94.99
NECEvent2014_4_5_scaffold_435 174_005_scaffold_435
Order: Clostridiales (78.57%)
14 17426 bp 29.70 10.86 92.34
NECEvent2014_4_5_scaffold_3479 174_005_scaffold_3479
Species: Clostridium sp. 7_2_43FAA (50%)
2 1330 bp 30.15 10.83 79.40
NECEvent2014_4_5_scaffold_626 174_005_scaffold_626
Species: Clostridium sp. 7_2_43FAA (62.5%)
8 12514 bp 29.66 10.82 87.05
NECEvent2014_4_5_scaffold_427 174_005_scaffold_427
Genus: Clostridium (85%)
20 17688 bp 29.57 10.82 96.20
NECEvent2014_4_5_scaffold_430 174_005_scaffold_430
Genus: Clostridium (61.9%)
21 17640 bp 29.56 10.78 87.09
NECEvent2014_4_5_scaffold_1776 174_005_scaffold_1776
Genus: Clostridium (80%)
5 3475 bp 28.58 10.75 68.20
NECEvent2014_4_5_scaffold_167 174_005_scaffold_167
Species: Clostridium sp. 7_2_43FAA (56.67%)
30 34796 bp 29.78 10.70 80.41
NECEvent2014_4_5_scaffold_312 174_005_scaffold_312
Genus: Clostridium (52.63%)
19 22567 bp 30.11 10.68 89.09
NECEvent2014_4_5_scaffold_1435 174_005_scaffold_1435 12 4676 bp 31.44 10.68 84.17
NECEvent2014_4_5_scaffold_1321 174_005_scaffold_1321
Species: Clostridium sp. 7_2_43FAA (60%)
5 5162 bp 28.26 10.64 82.82
NECEvent2014_4_5_scaffold_2271 174_005_scaffold_2271
Species: Clostridium celatum (50%)
2 2456 bp 27.24 10.63 71.34
NECEvent2014_4_5_scaffold_1488 174_005_scaffold_1488
Species: Clostridium sp. 7_2_43FAA (75%)
4 4462 bp 30.84 10.56 88.35
NECEvent2014_4_5_scaffold_1236 174_005_scaffold_1236
Genus: Clostridium (75%)
8 5685 bp 28.76 10.55 85.75
NECEvent2014_4_5_scaffold_1016 174_005_scaffold_1016
Species: Clostridium sp. 7_2_43FAA (83.33%)
6 7514 bp 29.53 10.52 94.70
NECEvent2014_4_5_scaffold_191 174_005_scaffold_191
Species: Clostridium sp. 7_2_43FAA (75.86%)
29 32281 bp 29.87 10.52 86.85
NECEvent2014_4_5_scaffold_1265 174_005_scaffold_1265
Species: Clostridium sp. 7_2_43FAA (100%)
3 5546 bp 30.89 10.52 95.31
NECEvent2014_4_5_scaffold_133 174_005_scaffold_133
Order: Clostridiales (55.56%)
63 38724 bp 29.43 10.47 92.34
NECEvent2014_4_5_scaffold_552 174_005_scaffold_552
Species: Clostridium sp. 7_2_43FAA (60%)
15 13964 bp 30.49 10.45 93.63
NECEvent2014_4_5_scaffold_2105 174_005_scaffold_2105
Species: Clostridium intestinale (50%)
4 2716 bp 29.71 10.44 72.79
NECEvent2014_4_5_scaffold_616 174_005_scaffold_616
Genus: Clostridium (80%)
15 12721 bp 28.40 10.44 80.09
NECEvent2014_4_5_scaffold_1160 174_005_scaffold_1160
Species: Clostridium sp. 7_2_43FAA (50%)
6 6137 bp 29.64 10.44 88.92
NECEvent2014_4_5_scaffold_1671 174_005_scaffold_1671
Species: Clostridium sp. 7_2_43FAA (66.67%)
3 3814 bp 29.50 10.38 88.10
NECEvent2014_4_5_scaffold_238 174_005_scaffold_238
Species: Clostridium sp. 7_2_43FAA (80%)
30 27598 bp 29.83 10.38 95.33
NECEvent2014_4_5_scaffold_1324 174_005_scaffold_1324
Species: Clostridium sp. 7_2_43FAA (100%)
3 5147 bp 30.52 10.37 88.95
NECEvent2014_4_5_scaffold_656 174_005_scaffold_656
Species: Clostridium sp. 7_2_43FAA (70%)
10 12006 bp 30.73 10.33 81.01
NECEvent2014_4_5_scaffold_1063 174_005_scaffold_1063
Species: Clostridium sp. 7_2_43FAA (75%)
8 7014 bp 28.36 10.31 79.77
NECEvent2014_4_5_scaffold_290 174_005_scaffold_290
Genus: Clostridium (68%)
25 24005 bp 28.75 10.29 87.93
NECEvent2014_4_5_scaffold_1026 174_005_scaffold_1026
Genus: Clostridium (80%)
5 7370 bp 29.74 10.28 83.77
NECEvent2014_4_5_scaffold_3078 174_005_scaffold_3078
Species: Clostridium sp. IBUN125C (100%)
2 1561 bp 25.75 10.28 78.60
NECEvent2014_4_5_scaffold_2337 174_005_scaffold_2337
Genus: Clostridium (66.67%)
3 2364 bp 28.05 10.28 68.82
NECEvent2014_4_5_scaffold_584 174_005_scaffold_584
Species: Clostridium sp. 7_2_43FAA (75%)
12 13365 bp 29.91 10.28 87.63
Displaying items 51-100 of 473 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.