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NECEvent2014_4_5_scaffold_386

Alias: 174_005_scaffold_386

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_386_1
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..103)
DNA (102bp) protein (34aa)
Transposase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT41_9FIRM
Transposase {ECO:0000313|EMBL:KGF34496.1}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
NECEvent2014_4_5_scaffold_386_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(181..1572)
DNA (1392bp) protein (464aa)
Hydroxyethylthiazole kinase {ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|SAAS:SAAS00137030};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Pept
hydroxyethylthiazole kinase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00031871A1 rbh
hydroxyethylthiazole kinase
NECEvent2014_4_5_scaffold_386_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1562..2368)
DNA (807bp) protein (269aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EFR32840.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EFR32840.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Pepton
phosphomethylpyrimidine kinase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002FDC96D rbh
phosphomethylpyrimidine kinase
NECEvent2014_4_5_scaffold_386_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2358..2873)
DNA (516bp) protein (172aa)
thiW protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002F94C1C rbh
Protein ThiW {ECO:0000313|EMBL:EFR32832.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
thiw protein
NECEvent2014_4_5_scaffold_386_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3057..4358)
DNA (1302bp) protein (434aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
phosphomethylpyrimidine synthase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00031D0D0E rbh
thiamine biosynthesis protein ThiC
NECEvent2014_4_5_scaffold_386_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4590..5129)
DNA (540bp) protein (180aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
adenine phosphoribosyltransferase (EC:2.4.2.7)
adenine phosphoribosyltransferase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002F53677 rbh
NECEvent2014_4_5_scaffold_386_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5214..6638
DNA (1425bp) protein (475aa)
sodium:proton antiporter n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002EBD5F7 rbh
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EFR32843.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sc
Na+/H+ antiporter NhaC
NECEvent2014_4_5_scaffold_386_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6692..7447
DNA (756bp) protein (252aa)
formate transporter n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D9297F rbh
Formate/nitrite transporter {ECO:0000313|EMBL:EFR32816.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146
formate/nitrite transporter
NECEvent2014_4_5_scaffold_386_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7474..8178)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002F99E3B rbh
TIGR02206 family protein {ECO:0000313|EMBL:EFR32823.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-
hypothetical protein
NECEvent2014_4_5_scaffold_386_10
Peptoniphilus sp. oral taxon 836, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8270..8686)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI000312C454
Uncharacterized protein {ECO:0000313|EMBL:EFK38802.1}; TaxID=768724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 83
thioesterase
NECEvent2014_4_5_scaffold_386_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8673..9731)
DNA (1059bp) protein (353aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=908338 species="Bacteria; Firmicutes; Clostri
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002EAD48C rbh
NECEvent2014_4_5_scaffold_386_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9809..10438
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00030FFF43 rbh
HAD-superfamily hydrolase, subfamily IB
Putative uncharacterized protein {ECO:0000313|EMBL:EFR32835.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
NECEvent2014_4_5_scaffold_386_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10499..12280)
DNA (1782bp) protein (594aa)
thioredoxin n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0003061A23 rbh
Thioredoxin {ECO:0000313|EMBL:EFR32831.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
thioredoxin
NECEvent2014_4_5_scaffold_386_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12280..13212)
DNA (933bp) protein (311aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphil
Thioredoxin reductase (EC:1.8.1.9)
thioredoxin-disulfide reductase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002EE3B3A rbh
NECEvent2014_4_5_scaffold_386_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13222..13827)
DNA (606bp) protein (202aa)
phosphatase n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI00031F3C8D rbh
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EFR32848.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus ha
fructose-2,6-bisphosphatase
NECEvent2014_4_5_scaffold_386_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13969..15579)
DNA (1611bp) protein (537aa)
DNA mismatch repair protein MutS n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0003059E3A rbh
MutS domain V protein {ECO:0000313|EMBL:EFR32819.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch
putative MutS domain protein
NECEvent2014_4_5_scaffold_386_17
unknown

Not on your lists

comp(15694..15882)
DNA (189bp) protein (63aa)

This feature has no annotations

NECEvent2014_4_5_scaffold_386_18
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15989..16936)
DNA (948bp) protein (316aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFR32827.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFR32827.1};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae;
4-phosphoerythronate dehydrogenase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KZ89_9FIRM rbh
D-3-phosphoglycerate dehydrogenase
NECEvent2014_4_5_scaffold_386_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17138..17866)
DNA (729bp) protein (243aa)
conjugal transfer protein TraX n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI000312BB0E rbh
Protein TraX {ECO:0000313|EMBL:EFR32820.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein
NECEvent2014_4_5_scaffold_386_20
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17934..18863)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI000310F293 rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:KGF11317.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacte
enoyl-(acyl-carrier-protein) reductase II
NECEvent2014_4_5_scaffold_386_21
unknown

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19171..19260
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 21 items

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