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NECEvent2014_4_5_scaffold_240

Alias: 174_005_scaffold_240

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_240_1
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..2079
DNA (2079bp) protein (693aa)
Chromosome partition protein Smc n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HTD2_9FIRM rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vagina
SMC domain-containing protein
NECEvent2014_4_5_scaffold_240_2
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2091..2555
DNA (465bp) protein (155aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HTD3_9FIRM rbh
NECEvent2014_4_5_scaffold_240_3
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2572..3486
DNA (915bp) protein (305aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=655811 species="B
methionyl-tRNA formyltransferase n=1 Tax=Anaerococcus obesiensis RepID=UPI000375290D rbh
methionyl-tRNA formyltransferase
NECEvent2014_4_5_scaffold_240_4
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3488..4786
DNA (1299bp) protein (433aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
rRNA methyltransferase n=1 Tax=Anaerococcus obesiensis RepID=UPI0002DD7DBC rbh
Fmu (Sun) domain-containing protein
NECEvent2014_4_5_scaffold_240_5
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4771..5796
DNA (1026bp) protein (342aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
23S rRNA methyltransferase n=1 Tax=Anaerococcus obesiensis RepID=UPI00037C6872 rbh
radical SAM enzyme, Cfr family
NECEvent2014_4_5_scaffold_240_6
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5799..6557
DNA (759bp) protein (253aa)
Protein phosphatase 2C {ECO:0000313|EMBL:EEU13015.1}; EC=3.1.3.16 {ECO:0000313|EMBL:EEU13015.1};; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.
phosphoprotein phosphatase n=1 Tax=Anaerococcus obesiensis RepID=UPI0002DD8A3D rbh
protein serine/threonine phosphatase
NECEvent2014_4_5_scaffold_240_7
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6535..8550
DNA (2016bp) protein (672aa)
Kinase domain protein {ECO:0000313|EMBL:EEU13016.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EEU13016.1};; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;
serine/threonine protein kinase n=1 Tax=Anaerococcus obesiensis RepID=UPI000309E126 rbh
serine/threonine protein kinase with PASTA sensor(s)
NECEvent2014_4_5_scaffold_240_8
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8535..9398
DNA (864bp) protein (288aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pepton
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HTD9_9FIRM rbh
ribosome small subunit-dependent GTPase A
NECEvent2014_4_5_scaffold_240_9
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9392..10054
DNA (663bp) protein (221aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; An
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
ribulose-phosphate 3-epimerase n=1 Tax=Anaerococcus obesiensis RepID=UPI0002DF9C81 rbh
NECEvent2014_4_5_scaffold_240_10
Anaerococcus hydrogenalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10150..10338)
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=2 Tax=Anaerococcus hydrogenalis RepID=B6W6J7_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=879306 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus hydrogenalis
50S ribosomal protein L28
NECEvent2014_4_5_scaffold_240_11
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10502..11404
DNA (903bp) protein (301aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HTE2_9FIRM rbh
NECEvent2014_4_5_scaffold_240_12
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11404..12258
DNA (855bp) protein (285aa)
UPF0042 nucleotide-binding protein HMPREF0078_0544 n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HTE3_9FIRM rbh
Nucleotide-binding protein HMPREF0078_0544 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococ
hypothetical protein
NECEvent2014_4_5_scaffold_240_13
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12246..12968
DNA (723bp) protein (241aa)
protein tyrosine/serine phosphatase n=1 Tax=Anaerococcus obesiensis RepID=UPI0002F4BED6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EEU13022.1}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vaginalis ATCC 5117
protein tyrosine/serine phosphatase
NECEvent2014_4_5_scaffold_240_14
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12980..13948
DNA (969bp) protein (323aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HTE5_9FIRM rbh
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilac
hypothetical protein
NECEvent2014_4_5_scaffold_240_15
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13897..17346
DNA (3450bp) protein (1150aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaer
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Anaerococcus obesiensis RepID=UPI0003014CA9 rbh
NECEvent2014_4_5_scaffold_240_16
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17357..18316
DNA (960bp) protein (320aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HTE7_9FIRM rbh
NECEvent2014_4_5_scaffold_240_17
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18337..20109
DNA (1773bp) protein (591aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;"
pyruvate kinase n=1 Tax=Anaerococcus obesiensis RepID=UPI0002F7764F rbh
pyruvate kinase
NECEvent2014_4_5_scaffold_240_18
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20109..21356
DNA (1248bp) protein (416aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EEU13027.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEU13027.1};; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphil
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HTE9_9FIRM rbh
TrmA family RNA methyltransferase
NECEvent2014_4_5_scaffold_240_19
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21667..22272
DNA (606bp) protein (202aa)
transcriptional regulator n=1 Tax=Anaerococcus obesiensis RepID=UPI000314B93D rbh
Transcriptional regulator {ECO:0000313|EMBL:KGF36052.1}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF
hypothetical protein
NECEvent2014_4_5_scaffold_240_20
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22251..23093
DNA (843bp) protein (281aa)
abortive phage infection protein n=1 Tax=Anaerococcus obesiensis RepID=UPI0003195E0C rbh
Abortive phage infection protein {ECO:0000313|EMBL:EXF27706.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
hypothetical protein
NECEvent2014_4_5_scaffold_240_21
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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23476..25461
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Listeria monocytogenes serotype 4bV str. LS542 RepID=U1VE40_LISMN rbh
SMC domain-containing protein rbh
SMC domain protein {ECO:0000313|EMBL:ADN35674.1}; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="Methanolacinia petro
NECEvent2014_4_5_scaffold_240_22
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

25412..27298
DNA (1887bp) protein (629aa)
ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Listeria monocytogenes FSL J1-208 RepID=H7CL98_LISMN rbh
UvrD/REP helicase
UvrD/REP helicase {ECO:0000313|EMBL:ADN35673.1}; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="Methanolacinia petrol
Displaying 22 items

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