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NECEvent2014_4_5_scaffold_324

Alias: 174_005_scaffold_324

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_324_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..403)
DNA (402bp) protein (134aa)
Sporulation integral membrane protein YtvI n=4 Tax=Clostridium perfringens RepID=B1RAV4_CLOPF
ytvI; sporulation integral membrane protein YtvI
Uncharacterized protein {ECO:0000313|EMBL:BAB82354.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_5_scaffold_324_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(415..1575)
DNA (1161bp) protein (387aa)
Cysteine desulfurase family protein n=1 Tax=Clostridium perfringens F262 RepID=H7D005_CLOPF rbh
Cysteine desulfurase family protein {ECO:0000313|EMBL:EIA15780.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
nifS; cysteine desulfurase
NECEvent2014_4_5_scaffold_324_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1518..2234)
DNA (717bp) protein (239aa)
LysE family translocator protein n=9 Tax=Clostridium perfringens RepID=H7D004_CLOPF rbh
LysE family translocator protein
Translocator protein, LysE family {ECO:0000313|EMBL:EDT13599.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E
NECEvent2014_4_5_scaffold_324_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2394..2627
DNA (234bp) protein (78aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D003_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15778.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_5_scaffold_324_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2660..3520
DNA (861bp) protein (287aa)
Mechanosensitive ion channel family protein n=7 Tax=Clostridium perfringens RepID=Q0TM06_CLOP1 rbh
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EDT13617.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_4_5_scaffold_324_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3557..3769
DNA (213bp) protein (71aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D001_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70820.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1
NECEvent2014_4_5_scaffold_324_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3913..4200
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=11 Tax=Clostridium perfringens RepID=RS6_CLOP1
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str.
NECEvent2014_4_5_scaffold_324_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4214..4666
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=10 Tax=Clostridium perfringens RepID=SSB_CLOPE rbh
ssb; single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=289380 species="Bacteria; Firmicutes; Clostrid
NECEvent2014_4_5_scaffold_324_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4697..4939
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=11 Tax=Clostridium perfringens RepID=RS18_CLOP1
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.
NECEvent2014_4_5_scaffold_324_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5222..5539
DNA (318bp) protein (106aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZZ7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13480.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_4_5_scaffold_324_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5557..6552
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XH47_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82344.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_4_5_scaffold_324_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6585..8543
DNA (1959bp) protein (653aa)
DHH family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TM13_CLOP1 rbh
DHH family protein
DHH family protein {ECO:0000313|EMBL:EDT13475.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;
NECEvent2014_4_5_scaffold_324_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8545..8991
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=11 Tax=Clostridium perfringens RepID=RL9_CLOP1
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000255|HAMAP-Rule:MF_00503}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
NECEvent2014_4_5_scaffold_324_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9007..10905
DNA (1899bp) protein (633aa)
ATP-dependent protease n=9 Tax=Clostridium perfringens RepID=H7CZZ3_CLOPF rbh
ATP-dependent protease {ECO:0000313|EMBL:EIA15768.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ATP-dependent protease
NECEvent2014_4_5_scaffold_324_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11321..12655
DNA (1335bp) protein (445aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase {ECO:0000313|EMBL:EDS80507.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDS80507.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Replicative DNA helicase n=7 Tax=Clostridium perfringens RepID=Q0TM16_CLOP1 rbh
NECEvent2014_4_5_scaffold_324_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12833..13633
DNA (801bp) protein (267aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
Pyrroline-5-carboxylate reductase n=3 Tax=Clostridium perfringens RepID=H7CZZ1_CLOPF rbh
NECEvent2014_4_5_scaffold_324_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13911..14399
DNA (489bp) protein (163aa)
PTS system, IIB component n=5 Tax=Clostridium perfringens RepID=H7CZZ0_CLOPF rbh
PTS system transporter subunit IIB
PTS system, IIB component {ECO:0000313|EMBL:EIA15765.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_5_scaffold_324_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14446..15237
DNA (792bp) protein (264aa)
PTS system, IIC component n=10 Tax=Clostridium perfringens RepID=H7CZY9_CLOPF rbh
PTS system transporter subunit IIC
PTS system, IIC component {ECO:0000313|EMBL:EDT13467.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
NECEvent2014_4_5_scaffold_324_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15237..16043
DNA (807bp) protein (269aa)
PTS system, IID component n=6 Tax=Clostridium perfringens RepID=H7CZY8_CLOPF rbh
PTS system transporter subunit IID
PTS system, IID component {ECO:0000313|EMBL:EIA15763.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_5_scaffold_324_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16216..16620
DNA (405bp) protein (135aa)
PTS system, IIA component n=5 Tax=Clostridium perfringens RepID=Q0TM21_CLOP1
PTS system transporter subunit IIA
Probable PTS system {ECO:0000313|EMBL:BAB82335.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Ty
NECEvent2014_4_5_scaffold_324_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16637..16900
DNA (264bp) protein (88aa)
Putative preprotein translocase subunit n=2 Tax=Clostridium perfringens RepID=B1BI91_CLOPF
preprotein translocase subunit
Putative preprotein translocase subunit {ECO:0000313|EMBL:EDT13478.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin
NECEvent2014_4_5_scaffold_324_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17037..17762
DNA (726bp) protein (242aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSY9_CLOPF rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDT70833.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
GntR family transcriptional regulator
NECEvent2014_4_5_scaffold_324_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17819..18676)
DNA (858bp) protein (286aa)
gatY; tagatose-bisphosphate aldolase (EC:4.1.2.2)
Tagatose bisphosphate family class II aldolase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVV5_CLOPF rbh
Putative tagatose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:EDT22619.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_4_5_scaffold_324_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18696..19868)
DNA (1173bp) protein (391aa)
Putative sugar isomerase, AgaS family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TM25_CLOP1 rbh
sugar isomerase
Putative sugar isomerase {ECO:0000313|EMBL:EIA15758.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_4_5_scaffold_324_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20104..20985)
DNA (882bp) protein (294aa)
sdhA; L-serine dehydratase, iron-sulfur-dependent subunit alpha (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EDT22641.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDT22641.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridia
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=7 Tax=Clostridium perfringens RepID=H7CZY2_CLOPF rbh
NECEvent2014_4_5_scaffold_324_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20986..21666)
DNA (681bp) protein (227aa)
sdhB; L-serine dehydratase, iron-sulfur-dependent subunit beta (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EDT13472.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EDT13472.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridial
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=9 Tax=Clostridium perfringens RepID=H7CZY1_CLOPF rbh
Displaying 26 items

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