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NECEvent2014_4_5_scaffold_403

Alias: 174_005_scaffold_403

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_403_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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615..2447
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Clostridium perfringens RepID=H7CZ33_CLOPF rbh
NECEvent2014_4_5_scaffold_403_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2467..2637
DNA (171bp) protein (57aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CZ32_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27445.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_4_5_scaffold_403_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2852..3664
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7Q9_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT23763.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
hypothetical protein
NECEvent2014_4_5_scaffold_403_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3890..4468
DNA (579bp) protein (193aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
5-formyltetrahydrofolate cyclo-ligase family protein n=2 Tax=Clostridium perfringens RepID=B1R7R0_CLOPF rbh
5-formyltetrahydrofolate cyclo-ligase
NECEvent2014_4_5_scaffold_403_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4564..6258
DNA (1695bp) protein (565aa)
Oligoendopeptidase, M3 family {ECO:0000313|EMBL:EDT27387.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDT27387.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
M3 family oligoendopeptidase (EC:3.4.24.-)
Oligoendopeptidase, M3 family n=4 Tax=Clostridium perfringens RepID=Q0TMX7_CLOP1 rbh
NECEvent2014_4_5_scaffold_403_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6523..8454)
DNA (1932bp) protein (644aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=9 Tax=Clostridium perfringens RepID=SYT_CLOP1 rbh
NECEvent2014_4_5_scaffold_403_trna_1
unknown

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8993..9073
DNA (81bp)
transferRNA
NECEvent2014_4_5_scaffold_403_trna_2
unknown

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9082..9152
DNA (71bp)
transferRNA
NECEvent2014_4_5_scaffold_403_trna_3
unknown

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9173..9244
DNA (72bp)
transferRNA
NECEvent2014_4_5_scaffold_403_trna_4
unknown

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9253..9323
DNA (71bp)
transferRNA
NECEvent2014_4_5_scaffold_403_trna_5
unknown

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9345..9417
DNA (73bp)
transferRNA
NECEvent2014_4_5_scaffold_403_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9722..11131
DNA (1410bp) protein (470aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUZ6_CLOPF rbh
Lipase/acylhydrolase family protein {ECO:0000313|EMBL:EDT23735.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
hypothetical protein
NECEvent2014_4_5_scaffold_403_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11190..11594)
DNA (405bp) protein (135aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CZ25_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15985.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_4_5_scaffold_403_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11784..12476
DNA (693bp) protein (231aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZ24_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15910.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_4_5_scaffold_403_trna_6
unknown

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12602..12675
DNA (74bp)
transferRNA
NECEvent2014_4_5_scaffold_403_trna_7
unknown

Not on your lists

12682..12753
DNA (72bp)
transferRNA
NECEvent2014_4_5_scaffold_403_trna_8
unknown

Not on your lists

12822..12892
DNA (71bp)
transferRNA
NECEvent2014_4_5_scaffold_403_trna_9
unknown

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12940..13012
DNA (73bp)
transferRNA
NECEvent2014_4_5_scaffold_403_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13151..13993
DNA (843bp) protein (281aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
pyridoxamine kinase (EC:2.7.1.35)
Pyridoxamine kinase n=1 Tax=Clostridium perfringens F262 RepID=H7CZ23_CLOPF rbh
NECEvent2014_4_5_scaffold_403_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14330..15643
DNA (1314bp) protein (438aa)
Na+/H+ antiporter family protein n=5 Tax=Clostridium perfringens RepID=H7CZ22_CLOPF rbh
Na+/H+ antiporter family protein
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EIA16088.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2
NECEvent2014_4_5_scaffold_403_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15820..18531)
DNA (2712bp) protein (904aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Clostridium perfringens F262 RepID=H7CXH5_CLOPF rbh
Displaying 21 items

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