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NECEvent2014_4_5_scaffold_442

Alias: 174_005_scaffold_442

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_5_scaffold_442_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1229
DNA (1227bp) protein (409aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=883064 species="Bacteria; F
Primosome assembly protein PriA n=1 Tax=Clostridium perfringens F262 RepID=H7CXE0_CLOPF
priA; primosome assembly protein PriA
NECEvent2014_4_5_scaffold_442_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1243..1686
DNA (444bp) protein (148aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Clostridium perfringens F262 RepID=H7CXD9_CLOPF
NECEvent2014_4_5_scaffold_442_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1706..2635
DNA (930bp) protein (310aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=883064 species="B
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=3 Tax=Clostridium perfringens RepID=H7CXD8_CLOPF rbh
NECEvent2014_4_5_scaffold_442_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2653..3348
DNA (696bp) protein (232aa)
Putative neutral zinc metallopeptidase n=1 Tax=Clostridium perfringens F262 RepID=H7CXD7_CLOPF rbh
Putative neutral zinc metallopeptidase {ECO:0000313|EMBL:EIA16592.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
hypothetical protein
NECEvent2014_4_5_scaffold_442_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3359..4687
DNA (1329bp) protein (443aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
16S rRNA methyltransferase B n=1 Tax=Clostridium perfringens F262 RepID=H7CXD6_CLOPF rbh
RNA-binding Sun protein
NECEvent2014_4_5_scaffold_442_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4719..5762
DNA (1044bp) protein (348aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000255|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000255|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000255|HA
Probable dual-specificity RNA methyltransferase RlmN n=7 Tax=Clostridium perfringens RepID=RLMN_CLOP1 rbh
ribosomal RNA large subunit methyltransferase N
NECEvent2014_4_5_scaffold_442_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5775..6494
DNA (720bp) protein (240aa)
Protein phosphatase family protein n=6 Tax=Clostridium perfringens RepID=H7CXD4_CLOPF rbh
protein phosphatase 2C
Protein phosphatase family protein {ECO:0000313|EMBL:EIA16589.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_4_5_scaffold_442_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6496..8568
DNA (2073bp) protein (691aa)
Serine/threonine protein kinase n=1 Tax=Clostridium perfringens F262 RepID=H7CXD3_CLOPF rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:EIA16588.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F26
serine/threonine protein kinase
NECEvent2014_4_5_scaffold_442_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8762..9625
DNA (864bp) protein (288aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
Putative ribosome biogenesis GTPase RsgA n=6 Tax=Clostridium perfringens RepID=RSGA_CLOPE rbh
ribosome-associated GTPase
NECEvent2014_4_5_scaffold_442_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9625..10278
DNA (654bp) protein (218aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium perfringens F262 RepID=H7CXD1_CLOPF rbh
NECEvent2014_4_5_scaffold_442_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10280..10909
DNA (630bp) protein (210aa)
thiamine pyrophosphokinase (EC:2.7.6.2)
Thiamine pyrophosphokinase {ECO:0000313|EMBL:EDT14027.1}; EC=2.7.6.2 {ECO:0000313|EMBL:EDT14027.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
Thiamine pyrophosphokinase n=8 Tax=Clostridium perfringens RepID=H7CXD0_CLOPF rbh
NECEvent2014_4_5_scaffold_442_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11152..11343)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=9 Tax=Clostridium perfringens RepID=RL28_CLOP1
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str
NECEvent2014_4_5_scaffold_442_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11602..11949
DNA (348bp) protein (116aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CXC8_CLOPF
hypothetical protein
Probable alkaline-shock protein {ECO:0000313|EMBL:BAB81439.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (st
NECEvent2014_4_5_scaffold_442_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11963..13609
DNA (1647bp) protein (549aa)
DAK2 domain-containing protein n=1 Tax=Clostridium perfringens F262 RepID=H7CXC7_CLOPF rbh
DAK2 domain-containing protein {ECO:0000313|EMBL:EIA16582.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262
DAK2 domain-containing protein
NECEvent2014_4_5_scaffold_442_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13762..15834
DNA (2073bp) protein (691aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EDT71381.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDT71381.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V479_CLOPF rbh
NECEvent2014_4_5_scaffold_442_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15899..16456
DNA (558bp) protein (186aa)
RNA methyltransferase, RsmD family n=10 Tax=Clostridium perfringens RepID=Q0TPM4_CLOP1 rbh
methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:EDT14039.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. J
NECEvent2014_4_5_scaffold_442_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16458..16952
DNA (495bp) protein (165aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
Phosphopantetheine adenylyltransferase n=8 Tax=Clostridium perfringens RepID=COAD_CLOPE rbh
coaD; phosphopantetheine adenylyltransferase
NECEvent2014_4_5_scaffold_442_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16961..17287
DNA (327bp) protein (109aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CXC3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81434.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
Displaying 18 items

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