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NECEvent2014_4_5_Clostridium_perfringens_28_8

NECEvent2014_4_5_Clostridium_perfringens_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 501-550 of 620 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_2162 174_005_scaffold_2162
Species: Clostridium perfringens (100%)
2 2636 bp 26.18 21.74 78.53
NECEvent2014_4_5_scaffold_1614 174_005_scaffold_1614
Species: Clostridium perfringens (100%)
4 3966 bp 28.06 8.02 78.52
NECEvent2014_4_5_scaffold_3141 174_005_scaffold_3141
Species: Clostridium perfringens (100%)
2 1521 bp 28.14 6.71 78.50
NECEvent2014_4_5_scaffold_1968 174_005_scaffold_1968
Species: Clostridium perfringens (100%)
2 2971 bp 28.14 7.17 78.36
NECEvent2014_4_5_scaffold_2538 174_005_scaffold_2538
Species: Clostridium perfringens (66.67%)
3 2096 bp 28.72 7.30 78.15
NECEvent2014_4_5_scaffold_1552 174_005_scaffold_1552
Species: Clostridium perfringens (100%)
2 4185 bp 28.24 6.67 78.06
NECEvent2014_4_5_scaffold_1233 174_005_scaffold_1233
Species: Clostridium perfringens (100%)
5 5701 bp 26.96 7.16 77.93
NECEvent2014_4_5_scaffold_2275 174_005_scaffold_2275
Species: Clostridium perfringens (100%)
1 2450 bp 26.12 6.61 77.88
NECEvent2014_4_5_scaffold_2582 174_005_scaffold_2582
Species: Clostridium perfringens (100%)
2 2031 bp 27.13 5.32 77.84
NECEvent2014_4_5_scaffold_1440 174_005_scaffold_1440
Species: Clostridium perfringens (100%)
3 4623 bp 27.90 7.17 77.74
NECEvent2014_4_5_scaffold_1787 174_005_scaffold_1787
Species: Clostridium perfringens (100%)
4 3439 bp 29.92 7.20 77.73
NECEvent2014_4_5_scaffold_3094 174_005_scaffold_3094
Species: Clostridium perfringens (100%)
1 1552 bp 31.31 11.79 77.71
NECEvent2014_4_5_scaffold_675 174_005_scaffold_675
Species: Clostridium perfringens (100%)
10 11654 bp 28.45 8.71 77.69
NECEvent2014_4_5_scaffold_1820 174_005_scaffold_1820
Species: Clostridium perfringens (100%)
4 3358 bp 24.90 6.39 77.55
NECEvent2014_4_5_scaffold_1381 174_005_scaffold_1381
Species: Clostridium perfringens (100%)
5 4916 bp 28.68 7.66 77.50
NECEvent2014_4_5_scaffold_2449 174_005_scaffold_2449
Species: Clostridium perfringens (100%)
2 2218 bp 28.94 10.48 77.37
NECEvent2014_4_5_scaffold_1512 174_005_scaffold_1512
Species: Clostridium perfringens (100%)
4 4368 bp 29.30 6.18 77.20
NECEvent2014_4_5_scaffold_1200 174_005_scaffold_1200
Species: Clostridium perfringens (100%)
5 5905 bp 27.52 7.72 77.12
NECEvent2014_4_5_scaffold_1448 174_005_scaffold_1448
Species: Clostridium perfringens (100%)
7 4601 bp 29.30 7.99 76.87
NECEvent2014_4_5_scaffold_2666 174_005_scaffold_2666
Species: Clostridium perfringens (100%)
2 1944 bp 28.45 7.41 76.85
NECEvent2014_4_5_scaffold_1708 174_005_scaffold_1708
Species: Clostridium perfringens (66.67%)
3 3698 bp 28.80 9.05 76.50
NECEvent2014_4_5_scaffold_2383 174_005_scaffold_2383
Species: Clostridium perfringens (100%)
2 2304 bp 25.56 6.84 76.43
NECEvent2014_4_5_scaffold_2534 174_005_scaffold_2534
Species: Clostridium perfringens (100%)
4 2101 bp 23.32 4.78 76.39
NECEvent2014_4_5_scaffold_1508 174_005_scaffold_1508
Species: Clostridium perfringens (100%)
4 4371 bp 28.35 7.58 76.32
NECEvent2014_4_5_scaffold_1715 174_005_scaffold_1715
Species: Clostridium perfringens (100%)
6 3669 bp 28.07 7.07 76.29
NECEvent2014_4_5_scaffold_2428 174_005_scaffold_2428
Species: Clostridium perfringens (100%)
4 2253 bp 26.23 5.73 76.17
NECEvent2014_4_5_scaffold_3936 174_005_scaffold_3936
Species: Clostridium perfringens (100%)
2 1115 bp 27.71 5.65 76.14
NECEvent2014_4_5_scaffold_1092 174_005_scaffold_1092
Species: Clostridium perfringens (100%)
6 6738 bp 26.79 6.41 76.14
NECEvent2014_4_5_scaffold_1878 174_005_scaffold_1878
Species: Clostridium perfringens (100%)
4 3212 bp 29.45 6.96 76.12
NECEvent2014_4_5_scaffold_868 174_005_scaffold_868
Species: Clostridium perfringens (100%)
8 9030 bp 27.98 9.05 76.05
NECEvent2014_4_5_scaffold_1259 174_005_scaffold_1259
Species: Clostridium perfringens (100%)
4 5561 bp 28.74 7.20 75.96
NECEvent2014_4_5_scaffold_1451 174_005_scaffold_1451
Species: Clostridium perfringens (100%)
5 4574 bp 26.10 6.89 75.69
NECEvent2014_4_5_scaffold_3346 174_005_scaffold_3346
Species: Clostridium perfringens (100%)
2 1405 bp 26.19 4.59 75.59
NECEvent2014_4_5_scaffold_4268 174_005_scaffold_4268
Species: Clostridium perfringens (100%)
1 1000 bp 18.20 3.75 75.30
NECEvent2014_4_5_scaffold_2761 174_005_scaffold_2761
Species: Clostridium perfringens (100%)
1 1841 bp 26.29 6.19 75.29
NECEvent2014_4_5_scaffold_3477 174_005_scaffold_3477
Species: Clostridium perfringens (100%)
2 1331 bp 27.05 6.09 75.28
NECEvent2014_4_5_scaffold_2917 174_005_scaffold_2917
Species: Clostridium perfringens (100%)
2 1710 bp 23.68 8.68 75.26
NECEvent2014_4_5_scaffold_3513 174_005_scaffold_3513
Species: Clostridium perfringens (100%)
2 1317 bp 25.74 5.35 75.17
NECEvent2014_4_5_scaffold_3214 174_005_scaffold_3214
Species: Clostridium perfringens (100%)
3 1485 bp 25.39 4.85 74.95
NECEvent2014_4_5_scaffold_1074 174_005_scaffold_1074
Species: Clostridium perfringens (100%)
5 6932 bp 29.53 7.73 74.74
NECEvent2014_4_5_scaffold_1654 174_005_scaffold_1654
Species: Clostridium perfringens (80%)
5 3856 bp 26.14 6.38 74.69
NECEvent2014_4_5_scaffold_2893 174_005_scaffold_2893
Species: Clostridium perfringens (100%)
3 1733 bp 26.08 5.37 74.61
NECEvent2014_4_5_scaffold_2107 174_005_scaffold_2107
Species: Clostridium perfringens (100%)
3 2716 bp 29.01 6.96 74.56
NECEvent2014_4_5_scaffold_1613 174_005_scaffold_1613
Species: Clostridium perfringens (100%)
2 3970 bp 23.90 6.35 74.51
NECEvent2014_4_5_scaffold_4143 174_005_scaffold_4143
Species: Clostridium perfringens (100%)
1 1045 bp 26.41 5.89 74.35
NECEvent2014_4_5_scaffold_1597 174_005_scaffold_1597
Species: Clostridium perfringens (100%)
4 4016 bp 28.11 7.84 74.10
NECEvent2014_4_5_scaffold_2376 174_005_scaffold_2376
Species: Clostridium perfringens (100%)
3 2309 bp 24.21 5.85 74.06
NECEvent2014_4_5_scaffold_2027 174_005_scaffold_2027
Species: Clostridium perfringens (100%)
3 2860 bp 32.59 8.13 74.06
NECEvent2014_4_5_scaffold_1422 174_005_scaffold_1422
Species: Clostridium perfringens (100%)
6 4723 bp 24.84 6.03 74.00
NECEvent2014_4_5_scaffold_2395 174_005_scaffold_2395
Species: Clostridium perfringens (100%)
3 2288 bp 25.39 4.92 73.95
Displaying items 501-550 of 620 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.