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NECEvent2014_4_5_Clostridium_perfringens_28_8

NECEvent2014_4_5_Clostridium_perfringens_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 551-600 of 620 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_2777 174_005_scaffold_2777
Species: Clostridium perfringens (100%)
3 1826 bp 28.64 7.48 95.45
NECEvent2014_4_5_scaffold_3144 174_005_scaffold_3144
Species: Clostridium perfringens (100%)
3 1519 bp 32.52 6.42 95.59
NECEvent2014_4_5_scaffold_1189 174_005_scaffold_1189
Species: Clostridium perfringens (100%)
7 5963 bp 28.69 9.33 95.59
NECEvent2014_4_5_scaffold_1606 174_005_scaffold_1606
Species: Clostridium perfringens (100%)
2 3995 bp 31.01 9.35 95.59
NECEvent2014_4_5_scaffold_1814 174_005_scaffold_1814
Species: Clostridium perfringens (100%)
2 3373 bp 30.27 9.87 95.61
NECEvent2014_4_5_scaffold_948 174_005_scaffold_948
Species: Clostridium perfringens (100%)
5 8180 bp 30.34 10.98 95.65
NECEvent2014_4_5_scaffold_712 174_005_scaffold_712
Species: Clostridium perfringens (100%)
13 11115 bp 27.34 8.64 95.74
NECEvent2014_4_5_scaffold_2172 174_005_scaffold_2172
Species: Clostridium perfringens (100%)
2 2616 bp 29.13 9.86 95.76
NECEvent2014_4_5_scaffold_1872 174_005_scaffold_1872
Species: Clostridium perfringens (100%)
2 3239 bp 32.05 9.45 95.77
NECEvent2014_4_5_scaffold_1752 174_005_scaffold_1752
Species: Clostridium perfringens (100%)
3 3523 bp 28.02 7.71 95.88
NECEvent2014_4_5_scaffold_2316 174_005_scaffold_2316
Species: Clostridium perfringens (100%)
2 2383 bp 25.56 4.72 96.06
NECEvent2014_4_5_scaffold_840 174_005_scaffold_840
Species: Clostridium perfringens (100%)
10 9417 bp 32.32 10.00 96.11
NECEvent2014_4_5_scaffold_3861 174_005_scaffold_3861
Species: Clostridium perfringens (100%)
2 1145 bp 28.12 5.76 96.16
NECEvent2014_4_5_scaffold_1299 174_005_scaffold_1299
Species: Clostridium perfringens (80%)
5 5325 bp 29.13 9.44 96.28
NECEvent2014_4_5_scaffold_1983 174_005_scaffold_1983
Species: Clostridium perfringens (100%)
2 2949 bp 34.01 11.44 96.34
NECEvent2014_4_5_scaffold_1252 174_005_scaffold_1252
Species: Clostridium perfringens (100%)
4 5605 bp 28.65 8.70 96.50
NECEvent2014_4_5_scaffold_1111 174_005_scaffold_1111
Species: Clostridium perfringens (100%)
1 6550 bp 29.42 10.17 96.50
NECEvent2014_4_5_scaffold_2055 174_005_scaffold_2055
Species: Clostridium perfringens (100%)
2 2797 bp 26.60 7.08 96.53
NECEvent2014_4_5_scaffold_3593 174_005_scaffold_3593
Species: Clostridium perfringens (100%)
1 1271 bp 27.85 8.62 96.54
NECEvent2014_4_5_scaffold_2278 174_005_scaffold_2278
Species: Clostridium perfringens (100%)
2 2445 bp 29.33 6.93 96.56
NECEvent2014_4_5_scaffold_1328 174_005_scaffold_1328
Species: Clostridium perfringens (100%)
8 5139 bp 28.14 9.95 96.61
NECEvent2014_4_5_scaffold_1490 174_005_scaffold_1490
Species: Clostridium perfringens (100%)
4 4449 bp 26.95 9.74 96.63
NECEvent2014_4_5_scaffold_1873 174_005_scaffold_1873
Species: Clostridium perfringens (100%)
3 3237 bp 28.45 8.29 96.66
NECEvent2014_4_5_scaffold_4212 174_005_scaffold_4212
Species: Clostridium perfringens (100%)
2 1020 bp 25.88 4.71 96.76
NECEvent2014_4_5_scaffold_4122 174_005_scaffold_4122
Species: Clostridium perfringens (100%)
2 1051 bp 27.59 3.00 96.77
NECEvent2014_4_5_scaffold_3389 174_005_scaffold_3389
Species: Clostridium perfringens (100%)
1 1376 bp 24.35 6.00 96.80
NECEvent2014_4_5_scaffold_3728 174_005_scaffold_3728
Species: Clostridium perfringens (100%)
2 1206 bp 27.61 4.23 97.01
NECEvent2014_4_5_scaffold_2140 174_005_scaffold_2140
Species: Halobacillus karajensis (50%)
2 2659 bp 23.02 3.72 97.14
NECEvent2014_4_5_scaffold_682 174_005_scaffold_682
Species: Clostridium perfringens (100%)
12 11529 bp 27.24 8.57 97.19
NECEvent2014_4_5_scaffold_944 174_005_scaffold_944
Species: Clostridium perfringens (100%)
3 8235 bp 30.38 8.78 97.30
NECEvent2014_4_5_scaffold_1083 174_005_scaffold_1083
Species: Clostridium perfringens (100%)
7 6830 bp 30.47 9.25 97.34
NECEvent2014_4_5_scaffold_2599 174_005_scaffold_2599
Species: Clostridium perfringens (100%)
3 2012 bp 27.29 3.73 97.37
NECEvent2014_4_5_scaffold_2131 174_005_scaffold_2131
Species: Clostridium perfringens (100%)
4 2670 bp 26.48 8.54 97.53
NECEvent2014_4_5_scaffold_1394 174_005_scaffold_1394
Species: Clostridium perfringens (100%)
1 4832 bp 30.42 8.23 97.54
NECEvent2014_4_5_scaffold_2115 174_005_scaffold_2115
Species: Clostridium perfringens (100%)
3 2705 bp 27.91 6.54 97.60
NECEvent2014_4_5_scaffold_1481 174_005_scaffold_1481
Species: Clostridium perfringens (100%)
3 4480 bp 30.07 8.91 97.70
NECEvent2014_4_5_scaffold_890 174_005_scaffold_890
Species: Clostridium perfringens (100%)
9 8784 bp 26.15 6.51 97.88
NECEvent2014_4_5_scaffold_2697 174_005_scaffold_2697
Species: Clostridium perfringens (100%)
3 1913 bp 25.14 4.78 98.01
NECEvent2014_4_5_scaffold_798 174_005_scaffold_798 9 10000 bp 29.24 7.68 98.04
NECEvent2014_4_5_scaffold_1829 174_005_scaffold_1829
Species: Clostridium perfringens (100%)
4 3343 bp 28.18 9.51 98.09
NECEvent2014_4_5_scaffold_1961 174_005_scaffold_1961
Species: Clostridium perfringens (100%)
2 2994 bp 26.62 7.31 98.20
NECEvent2014_4_5_scaffold_1130 174_005_scaffold_1130
Species: Clostridium perfringens (100%)
2 6377 bp 30.95 8.91 98.51
NECEvent2014_4_5_scaffold_3200 174_005_scaffold_3200
Species: Clostridium perfringens (100%)
2 1491 bp 24.14 7.55 98.59
NECEvent2014_4_5_scaffold_1621 174_005_scaffold_1621
Species: Clostridium perfringens (100%)
4 3953 bp 28.41 8.20 98.89
NECEvent2014_4_5_scaffold_3556 174_005_scaffold_3556
Species: Clostridium perfringens (100%)
1 1293 bp 30.24 6.26 99.07
NECEvent2014_4_5_scaffold_3504 174_005_scaffold_3504
Species: Clostridium perfringens (100%)
1 1319 bp 25.85 5.46 99.17
NECEvent2014_4_5_scaffold_1310 174_005_scaffold_1310
Species: Clostridium perfringens (100%)
4 5242 bp 26.36 7.38 99.29
NECEvent2014_4_5_scaffold_3633 174_005_scaffold_3633
Species: Clostridium perfringens (100%)
1 1252 bp 30.11 8.27 99.44
NECEvent2014_4_5_scaffold_2117 174_005_scaffold_2117
Species: Clostridium perfringens (100%)
5 2700 bp 28.78 8.33 99.67
NECEvent2014_4_5_scaffold_4000 174_005_scaffold_4000
Species: Clostridium baratii (100%)
1 1092 bp 34.98 3.30 99.73
Displaying items 551-600 of 620 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.