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NECEvent2014_4_5_Clostridium_perfringens_28_8

NECEvent2014_4_5_Clostridium_perfringens_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 401-450 of 620 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_2339 174_005_scaffold_2339
Species: Clostridium perfringens (100%)
3 2361 bp 25.88 7.81 89.96
NECEvent2014_4_5_scaffold_526 174_005_scaffold_526
Species: Clostridium perfringens (100%)
12 14551 bp 27.15 7.59 90.04
NECEvent2014_4_5_scaffold_2005 174_005_scaffold_2005
Species: Clostridium perfringens (100%)
2 2898 bp 27.57 7.35 90.06
NECEvent2014_4_5_scaffold_1138 174_005_scaffold_1138
Species: Clostridium perfringens (100%)
5 6298 bp 28.12 8.79 90.12
NECEvent2014_4_5_scaffold_2446 174_005_scaffold_2446
Species: Clostridium perfringens (100%)
2 2219 bp 29.38 7.84 90.18
NECEvent2014_4_5_scaffold_2561 174_005_scaffold_2561
Species: Clostridium perfringens (100%)
1 2069 bp 28.42 8.12 90.19
NECEvent2014_4_5_scaffold_3164 174_005_scaffold_3164
Species: Clostridium perfringens (100%)
3 1510 bp 28.15 6.16 90.20
NECEvent2014_4_5_scaffold_493 174_005_scaffold_493
Species: Clostridium perfringens (100%)
15 15515 bp 29.19 10.09 90.20
NECEvent2014_4_5_scaffold_579 174_005_scaffold_579
Species: Clostridium perfringens (100%)
9 13436 bp 30.44 9.20 90.21
NECEvent2014_4_5_scaffold_621 174_005_scaffold_621
Species: Clostridium perfringens (100%)
11 12594 bp 28.70 9.74 90.21
NECEvent2014_4_5_scaffold_1098 174_005_scaffold_1098
Species: Clostridium perfringens (100%)
7 6703 bp 26.60 6.94 90.23
NECEvent2014_4_5_scaffold_2218 174_005_scaffold_2218
Species: Clostridium perfringens (100%)
3 2556 bp 27.46 7.16 90.26
NECEvent2014_4_5_scaffold_1859 174_005_scaffold_1859
Species: Clostridium perfringens (100%)
2 3275 bp 29.13 10.35 90.32
NECEvent2014_4_5_scaffold_707 174_005_scaffold_707
Species: Clostridium perfringens (100%)
7 11199 bp 26.92 7.55 90.36
NECEvent2014_4_5_scaffold_1920 174_005_scaffold_1920
Species: Clostridium perfringens (100%)
4 3100 bp 26.32 7.35 90.39
NECEvent2014_4_5_scaffold_1432 174_005_scaffold_1432
Species: Clostridium perfringens (100%)
3 4679 bp 27.91 10.29 90.47
NECEvent2014_4_5_scaffold_732 174_005_scaffold_732
Species: Clostridium perfringens (100%)
12 10867 bp 29.57 8.81 90.49
NECEvent2014_4_5_scaffold_2834 174_005_scaffold_2834
Species: Clostridium perfringens (100%)
3 1786 bp 25.81 4.37 90.54
NECEvent2014_4_5_scaffold_3582 174_005_scaffold_3582
Species: Clostridium perfringens (66.67%)
3 1279 bp 26.82 4.46 90.54
NECEvent2014_4_5_scaffold_1445 174_005_scaffold_1445
Species: Clostridium perfringens (100%)
2 4611 bp 30.21 10.41 90.57
NECEvent2014_4_5_scaffold_2014 174_005_scaffold_2014
Species: Clostridium perfringens (100%)
4 2887 bp 25.36 5.14 90.61
NECEvent2014_4_5_scaffold_803 174_005_scaffold_803
Species: Clostridium perfringens (100%)
11 9921 bp 30.93 9.01 90.72
NECEvent2014_4_5_scaffold_1764 174_005_scaffold_1764
Species: Clostridium perfringens (100%)
4 3508 bp 30.36 7.40 90.74
NECEvent2014_4_5_scaffold_956 174_005_scaffold_956
Species: Clostridium perfringens (100%)
6 8097 bp 29.58 8.48 90.74
NECEvent2014_4_5_scaffold_2879 174_005_scaffold_2879
Species: Clostridium perfringens (100%)
3 1749 bp 30.07 8.92 90.74
NECEvent2014_4_5_scaffold_839 174_005_scaffold_839
Species: Clostridium perfringens (100%)
8 9437 bp 29.58 10.00 90.76
NECEvent2014_4_5_scaffold_726 174_005_scaffold_726
Species: Clostridium perfringens (90.91%)
11 10964 bp 30.54 8.80 90.76
NECEvent2014_4_5_scaffold_558 174_005_scaffold_558
Species: Clostridium perfringens (100%)
14 13891 bp 29.29 9.84 90.77
NECEvent2014_4_5_scaffold_1570 174_005_scaffold_1570
Species: Clostridium perfringens (100%)
3 4108 bp 29.53 6.83 90.77
NECEvent2014_4_5_scaffold_2132 174_005_scaffold_2132
Species: Clostridium perfringens (100%)
3 2669 bp 26.86 7.14 90.82
NECEvent2014_4_5_scaffold_3545 174_005_scaffold_3545
Species: Clostridium perfringens (100%)
2 1298 bp 28.89 10.05 90.83
NECEvent2014_4_5_scaffold_2943 174_005_scaffold_2943
Species: Clostridium perfringens (100%)
2 1681 bp 29.45 5.80 90.84
NECEvent2014_4_5_scaffold_292 174_005_scaffold_292
Species: Clostridium perfringens (100%)
24 23972 bp 30.35 9.61 90.84
NECEvent2014_4_5_scaffold_2242 174_005_scaffold_2242
Species: Clostridium perfringens (100%)
3 2503 bp 27.45 8.09 90.97
NECEvent2014_4_5_scaffold_1652 174_005_scaffold_1652
Species: Clostridium perfringens (100%)
2 3857 bp 28.96 9.37 91.00
NECEvent2014_4_5_scaffold_580 174_005_scaffold_580
Species: Clostridium perfringens (88.89%)
18 13423 bp 30.66 9.52 91.01
NECEvent2014_4_5_scaffold_1292 174_005_scaffold_1292
Species: Clostridium perfringens (100%)
5 5372 bp 28.65 8.13 91.03
NECEvent2014_4_5_scaffold_2257 174_005_scaffold_2257
Species: Clostridium perfringens (100%)
3 2477 bp 27.17 6.72 91.08
NECEvent2014_4_5_scaffold_1044 174_005_scaffold_1044
Species: Clostridium perfringens (100%)
8 7215 bp 29.91 9.81 91.10
NECEvent2014_4_5_scaffold_1669 174_005_scaffold_1669
Species: Clostridium perfringens (100%)
4 3822 bp 29.49 10.56 91.13
NECEvent2014_4_5_scaffold_2887 174_005_scaffold_2887
Species: Clostridium perfringens (100%)
2 1741 bp 27.00 5.86 91.15
NECEvent2014_4_5_scaffold_2217 174_005_scaffold_2217
Species: Clostridium perfringens (50%)
2 2557 bp 29.14 9.21 91.16
NECEvent2014_4_5_scaffold_1291 174_005_scaffold_1291
Species: Clostridium perfringens (100%)
5 5375 bp 27.44 7.03 91.20
NECEvent2014_4_5_scaffold_814 174_005_scaffold_814
Species: Clostridium perfringens (87.5%)
8 9735 bp 27.35 7.47 91.23
NECEvent2014_4_5_scaffold_612 174_005_scaffold_612
Species: Clostridium perfringens (100%)
9 12834 bp 28.08 9.35 91.35
NECEvent2014_4_5_scaffold_1566 174_005_scaffold_1566
Species: Clostridium perfringens (100%)
2 4130 bp 28.52 12.31 91.38
NECEvent2014_4_5_scaffold_1201 174_005_scaffold_1201
Species: Clostridium perfringens (100%)
5 5904 bp 29.12 9.38 91.41
NECEvent2014_4_5_scaffold_1612 174_005_scaffold_1612
Species: Clostridium perfringens (100%)
4 3971 bp 26.16 7.59 91.41
NECEvent2014_4_5_scaffold_533 174_005_scaffold_533
Species: Clostridium perfringens (100%)
17 14392 bp 30.20 8.00 91.43
NECEvent2014_4_5_scaffold_1534 174_005_scaffold_1534
Species: Clostridium perfringens (100%)
3 4254 bp 27.27 10.23 91.47
Displaying items 401-450 of 620 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.