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NECEvent2014_4_5_Clostridium_perfringens_28_8

NECEvent2014_4_5_Clostridium_perfringens_29_9
In projects: NECEvent2014_4_5

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 151-200 of 620 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_4_5_scaffold_277 174_005_scaffold_277
Species: Clostridium perfringens (100%)
22 24708 bp 28.07 9.15 92.07
NECEvent2014_4_5_scaffold_535 174_005_scaffold_535
Species: Clostridium perfringens (100%)
15 14366 bp 29.88 8.61 92.05
NECEvent2014_4_5_scaffold_619 174_005_scaffold_619
Species: Clostridium perfringens (100%)
9 12635 bp 29.81 9.24 91.98
NECEvent2014_4_5_scaffold_2421 174_005_scaffold_2421
Species: Clostridium perfringens (100%)
2 2264 bp 29.33 6.63 91.96
NECEvent2014_4_5_scaffold_233 174_005_scaffold_233
Species: Clostridium perfringens (100%)
21 27913 bp 30.01 9.45 91.92
NECEvent2014_4_5_scaffold_2775 174_005_scaffold_2775
Species: Clostridium perfringens (100%)
2 1828 bp 28.77 7.06 91.90
NECEvent2014_4_5_scaffold_2864 174_005_scaffold_2864
Species: Clostridium perfringens (100%)
2 1763 bp 29.33 9.27 91.89
NECEvent2014_4_5_scaffold_914 174_005_scaffold_914
Species: Clostridium perfringens (100%)
7 8507 bp 29.01 9.59 91.87
NECEvent2014_4_5_scaffold_1542 174_005_scaffold_1542
Species: Clostridium perfringens (100%)
4 4223 bp 25.03 6.89 91.85
NECEvent2014_4_5_scaffold_1178 174_005_scaffold_1178
Species: Clostridium perfringens (100%)
5 5997 bp 28.05 8.85 91.80
NECEvent2014_4_5_scaffold_2309 174_005_scaffold_2309
Species: Clostridium perfringens (100%)
3 2392 bp 26.67 10.16 91.68
NECEvent2014_4_5_scaffold_606 174_005_scaffold_606
Species: Clostridium perfringens (90%)
10 12973 bp 28.00 9.16 91.66
NECEvent2014_4_5_scaffold_2436 174_005_scaffold_2436
Species: Clostridium perfringens (80%)
5 2242 bp 25.20 5.95 91.66
NECEvent2014_4_5_scaffold_1721 174_005_scaffold_1721
Species: Clostridium perfringens (100%)
4 3643 bp 30.00 10.99 91.66
NECEvent2014_4_5_scaffold_3415 174_005_scaffold_3415
Species: Clostridium perfringens (100%)
1 1362 bp 24.96 5.84 91.63
NECEvent2014_4_5_scaffold_1289 174_005_scaffold_1289
Species: Clostridium perfringens (100%)
6 5378 bp 31.02 7.98 91.60
NECEvent2014_4_5_scaffold_157 174_005_scaffold_157
Species: Clostridium perfringens (100%)
36 35816 bp 29.80 10.02 91.58
NECEvent2014_4_5_scaffold_2040 174_005_scaffold_2040
Species: Clostridium perfringens (100%)
2 2822 bp 30.05 12.54 91.53
NECEvent2014_4_5_scaffold_575 174_005_scaffold_575
Species: Clostridium perfringens (100%)
18 13485 bp 28.73 9.04 91.52
NECEvent2014_4_5_scaffold_3881 174_005_scaffold_3881
Species: Clostridium perfringens (100%)
1 1138 bp 24.08 4.88 91.48
NECEvent2014_4_5_scaffold_1534 174_005_scaffold_1534
Species: Clostridium perfringens (100%)
3 4254 bp 27.27 10.23 91.47
NECEvent2014_4_5_scaffold_533 174_005_scaffold_533
Species: Clostridium perfringens (100%)
17 14392 bp 30.20 8.00 91.43
NECEvent2014_4_5_scaffold_1612 174_005_scaffold_1612
Species: Clostridium perfringens (100%)
4 3971 bp 26.16 7.59 91.41
NECEvent2014_4_5_scaffold_1201 174_005_scaffold_1201
Species: Clostridium perfringens (100%)
5 5904 bp 29.12 9.38 91.41
NECEvent2014_4_5_scaffold_1566 174_005_scaffold_1566
Species: Clostridium perfringens (100%)
2 4130 bp 28.52 12.31 91.38
NECEvent2014_4_5_scaffold_612 174_005_scaffold_612
Species: Clostridium perfringens (100%)
9 12834 bp 28.08 9.35 91.35
NECEvent2014_4_5_scaffold_814 174_005_scaffold_814
Species: Clostridium perfringens (87.5%)
8 9735 bp 27.35 7.47 91.23
NECEvent2014_4_5_scaffold_1291 174_005_scaffold_1291
Species: Clostridium perfringens (100%)
5 5375 bp 27.44 7.03 91.20
NECEvent2014_4_5_scaffold_2217 174_005_scaffold_2217
Species: Clostridium perfringens (50%)
2 2557 bp 29.14 9.21 91.16
NECEvent2014_4_5_scaffold_2887 174_005_scaffold_2887
Species: Clostridium perfringens (100%)
2 1741 bp 27.00 5.86 91.15
NECEvent2014_4_5_scaffold_1669 174_005_scaffold_1669
Species: Clostridium perfringens (100%)
4 3822 bp 29.49 10.56 91.13
NECEvent2014_4_5_scaffold_1044 174_005_scaffold_1044
Species: Clostridium perfringens (100%)
8 7215 bp 29.91 9.81 91.10
NECEvent2014_4_5_scaffold_2257 174_005_scaffold_2257
Species: Clostridium perfringens (100%)
3 2477 bp 27.17 6.72 91.08
NECEvent2014_4_5_scaffold_1292 174_005_scaffold_1292
Species: Clostridium perfringens (100%)
5 5372 bp 28.65 8.13 91.03
NECEvent2014_4_5_scaffold_580 174_005_scaffold_580
Species: Clostridium perfringens (88.89%)
18 13423 bp 30.66 9.52 91.01
NECEvent2014_4_5_scaffold_1652 174_005_scaffold_1652
Species: Clostridium perfringens (100%)
2 3857 bp 28.96 9.37 91.00
NECEvent2014_4_5_scaffold_2242 174_005_scaffold_2242
Species: Clostridium perfringens (100%)
3 2503 bp 27.45 8.09 90.97
NECEvent2014_4_5_scaffold_292 174_005_scaffold_292
Species: Clostridium perfringens (100%)
24 23972 bp 30.35 9.61 90.84
NECEvent2014_4_5_scaffold_2943 174_005_scaffold_2943
Species: Clostridium perfringens (100%)
2 1681 bp 29.45 5.80 90.84
NECEvent2014_4_5_scaffold_3545 174_005_scaffold_3545
Species: Clostridium perfringens (100%)
2 1298 bp 28.89 10.05 90.83
NECEvent2014_4_5_scaffold_2132 174_005_scaffold_2132
Species: Clostridium perfringens (100%)
3 2669 bp 26.86 7.14 90.82
NECEvent2014_4_5_scaffold_1570 174_005_scaffold_1570
Species: Clostridium perfringens (100%)
3 4108 bp 29.53 6.83 90.77
NECEvent2014_4_5_scaffold_558 174_005_scaffold_558
Species: Clostridium perfringens (100%)
14 13891 bp 29.29 9.84 90.77
NECEvent2014_4_5_scaffold_726 174_005_scaffold_726
Species: Clostridium perfringens (90.91%)
11 10964 bp 30.54 8.80 90.76
NECEvent2014_4_5_scaffold_839 174_005_scaffold_839
Species: Clostridium perfringens (100%)
8 9437 bp 29.58 10.00 90.76
NECEvent2014_4_5_scaffold_2879 174_005_scaffold_2879
Species: Clostridium perfringens (100%)
3 1749 bp 30.07 8.92 90.74
NECEvent2014_4_5_scaffold_956 174_005_scaffold_956
Species: Clostridium perfringens (100%)
6 8097 bp 29.58 8.48 90.74
NECEvent2014_4_5_scaffold_1764 174_005_scaffold_1764
Species: Clostridium perfringens (100%)
4 3508 bp 30.36 7.40 90.74
NECEvent2014_4_5_scaffold_803 174_005_scaffold_803
Species: Clostridium perfringens (100%)
11 9921 bp 30.93 9.01 90.72
NECEvent2014_4_5_scaffold_2014 174_005_scaffold_2014
Species: Clostridium perfringens (100%)
4 2887 bp 25.36 5.14 90.61
Displaying items 151-200 of 620 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.