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NECEvent2014_4_6_scaffold_130

Alias: 174_006_scaffold_130

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_6_scaffold_130_1
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4..402)
DNA (399bp) protein (133aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Ac
fkbP; FK506-binding protein (EC:5.2.1.8)
peptidylprolyl isomerase n=1 Tax=Actinomyces sp. ph3 RepID=UPI0003055A09
NECEvent2014_4_6_scaffold_130_2
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(445..1404)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YPH6_9ACTO rbh
Predicted membrane protein {ECO:0000313|EMBL:CRH63141.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomati
hypothetical protein
NECEvent2014_4_6_scaffold_130_3
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1901..3133
DNA (1233bp) protein (411aa)
Site-specific recombinase, phage integrase family n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W0M5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGF01674.1}; TaxID=1219581 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S4-C9.;"
DNA integration/recombination/inversion protein
NECEvent2014_4_6_scaffold_130_4
unknown

Not on your lists

3521..3742
DNA (222bp) protein (74aa)

This feature has no annotations

NECEvent2014_4_6_scaffold_130_5
unknown

Not on your lists

3739..3999
DNA (261bp) protein (87aa)

This feature has no annotations

NECEvent2014_4_6_scaffold_130_6
unknown

Not on your lists

4062..4319
DNA (258bp) protein (86aa)

This feature has no annotations

NECEvent2014_4_6_scaffold_130_7
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4325..5176
DNA (852bp) protein (284aa)
Bifunctional DNA primase/polymerase domain protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W525_9ACTO
hypothetical protein
Bifunctional DNA primase/polymerase domain protein {ECO:0000313|EMBL:EEH66182.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces
NECEvent2014_4_6_scaffold_130_8
Mycobacterium sp. TKK-01-0059, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5173..6384
DNA (1212bp) protein (404aa)
Putative uncharacterized protein n=1 Tax=Dietzia cinnamea P4 RepID=E6J9R6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KEF99971.1}; TaxID=1324269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
hypothetical protein
NECEvent2014_4_6_scaffold_130_trna_1
unknown

Not on your lists

comp(8024..8097)
DNA (74bp)
transferRNA
NECEvent2014_4_6_scaffold_130_9
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8294..9715
DNA (1422bp) protein (474aa)
sodium:proton antiporter n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B4811C rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomy
nhaA; Na+/H+ antiporter NhaA
NECEvent2014_4_6_scaffold_130_10
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9828..10826)
DNA (999bp) protein (333aa)
Ppx/GppA family phosphatase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X4U8_9ACTO rbh
Ppx/GppA family phosphatase {ECO:0000313|EMBL:ENO18711.1}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
Ppx/GppA phosphatase
NECEvent2014_4_6_scaffold_130_11
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10904..11443)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0Z0T0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ85654.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;
hypothetical protein
NECEvent2014_4_6_scaffold_130_12
Actinomyces georgiae, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11440..12345)
DNA (906bp) protein (302aa)
Septum formation initiator (Fragment) n=1 Tax=Actinomyces georgiae F0490 RepID=J0NN35_9ACTO
Septum formation initiator {ECO:0000313|EMBL:EJF46147.1}; Flags: Fragment;; TaxID=1125717 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces georg
septum formation initiator
NECEvent2014_4_6_scaffold_130_13
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12509..13789)
DNA (1281bp) protein (427aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6W849_9ACTO rbh
NECEvent2014_4_6_scaffold_130_14
unknown

Not on your lists

comp(13990..14586)
DNA (597bp) protein (199aa)

This feature has no annotations

NECEvent2014_4_6_scaffold_130_15
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14780..18457)
DNA (3678bp) protein (1226aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1203556 species="Bacteria; A
transcription-repair coupling factor n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B62F3B rbh
transcription-repair coupling factor
NECEvent2014_4_6_scaffold_130_16
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18552..19163)
DNA (612bp) protein (204aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
peptidyl-tRNA hydrolase (EC:3.1.1.29)
peptidyl-tRNA hydrolase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B44E1A
NECEvent2014_4_6_scaffold_130_17
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19305..20606)
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI000302EF90 rbh
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S6-Spd3.;"
galactokinase
NECEvent2014_4_6_scaffold_130_18
Actinomyces coleocanis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20608..21816)
DNA (1209bp) protein (403aa)
UTP--hexose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:EEH64134.1}; EC=2.7.7.10 {ECO:0000313|EMBL:EEH64134.1};; TaxID=525245 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZL5_9ACTO rbh
NECEvent2014_4_6_scaffold_130_19
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22121..22663
DNA (543bp) protein (181aa)
2''''-5'''' RNA ligase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B774D6
Uncharacterized protein {ECO:0000313|EMBL:ENO18720.1}; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces cardiffensis F0333.;"
2'-5' RNA ligase
NECEvent2014_4_6_scaffold_130_20
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22785..24515
DNA (1731bp) protein (577aa)
Membrane protein ribonuclease BN family protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S1R9_PROA4 rbh
membrane protein ribonuclease BN family protein
Membrane protein ribonuclease BN family protein {ECO:0000313|EMBL:AFV88507.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="
NECEvent2014_4_6_scaffold_130_21
unknown

Not on your lists

25486..25623
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 22 items

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