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NECEvent2014_4_6_scaffold_407

Alias: 174_006_scaffold_407

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_6_scaffold_407_1
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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3..335
DNA (333bp) protein (111aa)
DNA repair protein RecO n=1 Tax=Actinomyces sp. oral taxon 877 str. F0543 RepID=U1R197_9ACTO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1227264 species="Bacteria; Actinobacteria; Ac
DNA repair protein recO
NECEvent2014_4_6_scaffold_407_2
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

332..1153
DNA (822bp) protein (274aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;
Isoprenyl transferase n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JKW8_9ACTO rbh
undecaprenyl diphosphate synthase
NECEvent2014_4_6_scaffold_407_3
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1159..1698)
DNA (540bp) protein (180aa)
membrane protein n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B5F674
Membrane protein {ECO:0000313|EMBL:KGE99026.1}; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S6-Spd3.;"
hypothetical protein
NECEvent2014_4_6_scaffold_407_4
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(1698..2099)
DNA (402bp) protein (134aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B54FE9
Oxidative stress genes repressor {ECO:0000313|EMBL:CRH60392.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trac
zinc uptake regulator, Fur family
NECEvent2014_4_6_scaffold_407_5
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2177..3151)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZQ07_9ACTO rbh
ABC 3 transport family protein {ECO:0000313|EMBL:EDN81476.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus ATCC 1
ABC transporter
NECEvent2014_4_6_scaffold_407_6
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3144..3854)
DNA (711bp) protein (237aa)
ABC transporter, ATP-binding protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BE51_9ACTO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN81475.1}; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces odontolyticus
ABC transporter
NECEvent2014_4_6_scaffold_407_7
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3887..4921)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YQ02_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EJZ85541.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;
periplasmic solute binding protein
NECEvent2014_4_6_scaffold_407_8
Actinomyces sp. oral taxon 180, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4983..6011)
DNA (1029bp) protein (343aa)
HTH-type transcriptional regulator n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KR03_9ACTO rbh
HTH-type transcriptional regulator {ECO:0000313|EMBL:EFU61561.1}; TaxID=888052 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 1
LacI family transcriptional regulator
NECEvent2014_4_6_scaffold_407_9
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6225..7481
DNA (1257bp) protein (419aa)
ABC transporter, solute-binding protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TXD0_9ACTO rbh
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EWC95309.1}; TaxID=936549 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM54.;
maltose-binding periplasmic protein
NECEvent2014_4_6_scaffold_407_10
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7613..9247
DNA (1635bp) protein (545aa)
Fructose-bisphosphate aldolase (EC:4.1.2.13)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZQ02_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD72097.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_4_6_scaffold_407_11
Actinomyces coleocanis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9247..11340
DNA (2094bp) protein (698aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
glyQS; glycine--tRNA ligase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W0B2_9ACTO rbh
NECEvent2014_4_6_scaffold_407_12
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

11359..12624
DNA (1266bp) protein (422aa)
Putative dihydrouridine synthase {ECO:0000313|EMBL:CRH78358.1}; EC=1.-.-.- {ECO:0000313|EMBL:CRH78358.1};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila
hydrolase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B587AC rbh
hydrolase
NECEvent2014_4_6_scaffold_407_13
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12629..13372
DNA (744bp) protein (248aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214,
3-dehydroquinate dehydratase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B5CFE9
3-dehydroquinate dehydratase
NECEvent2014_4_6_scaffold_407_14
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13410..16097
DNA (2688bp) protein (896aa)
Cell wall protein containing Ig-like domains (Group2 and 3) {ECO:0000313|EMBL:KFJ07382.1}; EC=3.2.1.51 {ECO:0000313|EMBL:KFJ07382.1};; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales
Alpha-L-fucosidase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFV9_BIFBI rbh
alpha-L-fucosidase
NECEvent2014_4_6_scaffold_407_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16118..16546)
DNA (429bp) protein (143aa)
UPI0003D62258 related cluster n=1 Tax=unknown RepID=UPI0003D62258
TetR family transcriptional regulator {ECO:0000313|EMBL:ETI82799.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense D
putative TetR family transcriptional regulator
NECEvent2014_4_6_scaffold_407_16
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16587..17159
DNA (573bp) protein (191aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PKC7_9ACTO
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EKY15827.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp
2-hydroxyglutaryl-CoA dehydratase activator
NECEvent2014_4_6_scaffold_407_17
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17079..17741)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B308B0
Uncharacterized protein {ECO:0000313|EMBL:EEH66591.1}; TaxID=525246 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
Displaying 17 items

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