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NECEvent2014_4_6_scaffold_139_12

Organism: NECEvent2014_4_6_Actinomyces_59_150

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(13587..14534)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 349.0
  • Bit_score: 290
  • Evalue 2.10e-75
tRNA pseudouridine synthase B n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZN04_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 349.0
  • Bit_score: 288
  • Evalue 9.60e-75
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 291.0
  • Bit_score: 255
  • Evalue 2.00e-65

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Taxonomy

Actinomyces sp. ICM54 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGACACCTACCGATTCGAAGCAGAAGCCACAGCCACCCTCGGGAATTCTGATCGTTGACAAGCCCCAGGGGATGACCAGTCACGACGTGGTGAGCCGTGTGCGACGACTGGCGCACACCCGTAAAGTCGGGCACGCCGGCACGCTCGACCCGATGGCGACCGGTGTGCTGGTGATCGGTATCGGCAAAGCGACGCGGCTGCTCACCTACCTGAGCGCCAGTACGAAGATCTATGACGCCACCATGCGTCTGGGAATCGGGACAACCAGCGAGGACGCAGATGGGCAGGTCACGGAATGCCCAGGAGCCAGCGATGTGACAGTCGATCAGGTGGCCGACGCTGCCCGTGTGGTGCGTGAACGCGGGTGGCAGGTGCCCTCTGCCGTCTCTGCCATCAAGATCGGTGGGAAGCGTGCGCACGCTCTGGTGCGCGAAGGAGAAGACGTCCACATCCCTCCGCGCGAGGTTCATATCAGCGCGATTGACCTGACTGGGCCGCTCCGCCCGACCGCAGCGGAGGCAGGCGTGCCGGTGGTGGACTGTGATATTCACGTTGAATGTTCGGCCGGCACCTACGTGCGAGCCATTGCCCGCGACATTGCCGAACAGCTCGGCACAGCTGCACACCTGACTGCTTTGCGCCGGCTGCAGGCCGGGGCATTCACTCTGGACGATGCTGCGCCACTGGATCGGCTTGAAGCGCTGACCGCTGAAGGAGCCGACGTGCCGATCATTCCCATTGGTGAGGCCGTCAGCAGACTCTTTGACACCCTTGAGATTTCTCAGGAGGAGGCCGCGCGCTTTGCTCACGGGAATCCGCCTGAACGCAGCGGCGCGCAGCTGGCTGATATGAATGTGGACCAGCCGATCGGCGTGTATTGTGAAGGCCGGCCTTTAGGCCTGGTGAAGGTACAAAACGGTGCTCTGCGCACGATAAGGGTGTGGTAA
PROTEIN sequence
Length: 316
MTPTDSKQKPQPPSGILIVDKPQGMTSHDVVSRVRRLAHTRKVGHAGTLDPMATGVLVIGIGKATRLLTYLSASTKIYDATMRLGIGTTSEDADGQVTECPGASDVTVDQVADAARVVRERGWQVPSAVSAIKIGGKRAHALVREGEDVHIPPREVHISAIDLTGPLRPTAAEAGVPVVDCDIHVECSAGTYVRAIARDIAEQLGTAAHLTALRRLQAGAFTLDDAAPLDRLEALTAEGADVPIIPIGEAVSRLFDTLEISQEEAARFAHGNPPERSGAQLADMNVDQPIGVYCEGRPLGLVKVQNGALRTIRVW*