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NECEvent2014_4_6_scaffold_139

Alias: 174_006_scaffold_139

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_6_scaffold_139_1
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..692)
DNA (690bp) protein (230aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6XDG7_9ACTO rbh
NECEvent2014_4_6_scaffold_139_2
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(727..2067)
DNA (1341bp) protein (447aa)
processing peptidase (EC:3.4.24.64)
Uncharacterized protein n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z3M7_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD71398.1}; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. HPA0247.;"
NECEvent2014_4_6_scaffold_139_3
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2067..2759)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Actinomyces sp. ph3 RepID=UPI0002E19E32
Uncharacterized protein {ECO:0000313|EMBL:EKY16516.1}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0
NECEvent2014_4_6_scaffold_139_4
Actinomyces sp. HPA0247, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2969..5389)
DNA (2421bp) protein (807aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide
pnp; polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Actinomyces sp. HPA0247 RepID=S3A560_9ACTO rbh
NECEvent2014_4_6_scaffold_139_5
Actinomyces sp. oral taxon 178, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5579..5848)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=3 Tax=Actinomyces RepID=E8JG23_9ACTO
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Ac
rpsO; 30S ribosomal protein S15
NECEvent2014_4_6_scaffold_139_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6090..7667)
DNA (1578bp) protein (526aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KHK99973.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
sulfatase family protein
NECEvent2014_4_6_scaffold_139_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7680..9038)
DNA (1359bp) protein (453aa)
MFS transporter n=1 Tax=Rhodococcus opacus RepID=UPI00029CCE6F
Uncharacterized protein {ECO:0000313|EMBL:KHK99972.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
Shikimate transporter
NECEvent2014_4_6_scaffold_139_8
Actinobaculum sp. oral taxon 183, Actinobaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9314..9886
DNA (573bp) protein (191aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Actinobaculum sp. oral taxon 183 str. F0552 RepID=U1RDG7_9ACTO
YbaK/proline--tRNA ligase associated domain protein {ECO:0000313|EMBL:ERH17703.1}; TaxID=1227261 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinobaculum.;" source="Actinoba
prolyl-tRNA synthetase
NECEvent2014_4_6_scaffold_139_9
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9972..11261
DNA (1290bp) protein (430aa)
Putative beta-glucosidase n=1 Tax=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) RepID=B1VDX9_CORU7 rbh
Beta-glucosidase {ECO:0000313|EMBL:KGN37739.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
beta-glucosidase
NECEvent2014_4_6_scaffold_139_10
Corynebacterium sp. HFH0082, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11258..12556
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Corynebacterium sp. HFH0082 RepID=S2X6R7_9CORY rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD47738.1}; TaxID=1078764 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium sp. HFH0082.;"
MFS transporter permease
NECEvent2014_4_6_scaffold_139_11
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12594..13583)
DNA (990bp) protein (330aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=888050 species="Bacteria; Actinobacter
Riboflavin biosynthesis protein RibF n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6XCT4_9ACTO rbh
riboflavin biosynthesis protein RibF
NECEvent2014_4_6_scaffold_139_12
Actinomyces sp. ICM54, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13587..14534)
DNA (948bp) protein (316aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Actinomyces sp. HPA0247 RepID=S2ZN04_9ACTO
tRNA pseudouridine synthase B
NECEvent2014_4_6_scaffold_139_13
Actinomyces sp. oral taxon 181, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14549..15064)
DNA (516bp) protein (172aa)
Ribosome-binding factor A n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PM65_9ACTO
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="A
ribosome-binding factor A
NECEvent2014_4_6_scaffold_139_14
Actinomyces coleocanis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15198..16877
DNA (1680bp) protein (560aa)
AMP-binding enzyme n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VXW9_9ACTO rbh
AMP-binding enzyme {ECO:0000313|EMBL:EEH64272.1}; TaxID=525245 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces coleocanis DSM 15436.;"
putative o-succinylbenzoate--CoA ligase
NECEvent2014_4_6_scaffold_139_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17029..17472
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL36526.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
NECEvent2014_4_6_scaffold_139_16
unknown

Not on your lists

17469..17804
DNA (336bp) protein (112aa)

This feature has no annotations

NECEvent2014_4_6_scaffold_139_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17797..19314
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R450_LEIAQ
ADP-ribosyltransferase exoenzyme {ECO:0000313|EMBL:KJL36528.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.
rhs protein
NECEvent2014_4_6_scaffold_139_18
Actinomyces coleocanis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19398..20513)
DNA (1116bp) protein (372aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VXX0_9ACTO rbh
radical SAM protein
NECEvent2014_4_6_scaffold_139_19
Actinomyces coleocanis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20523..21188)
DNA (666bp) protein (222aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
lipB; lipoyltransferase (EC:2.3.1.-)
Octanoyltransferase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VXX1_9ACTO
NECEvent2014_4_6_scaffold_139_20
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21248..22132
DNA (885bp) protein (295aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1089455 species=
nadE; NAD+ synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5US58_9MICO rbh
NECEvent2014_4_6_scaffold_139_21
unknown

Not on your lists

22132..22680
DNA (549bp) protein (183aa)

This feature has no annotations

NECEvent2014_4_6_scaffold_139_22
Actinomyces graevenitzii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22779..24572
DNA (1794bp) protein (598aa)
Putative uncharacterized protein n=1 Tax=Actinomyces graevenitzii C83 RepID=G9PCV4_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EHM89568.1}; TaxID=435830 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces graevenitzii C83.;"
hypothetical protein
Displaying 22 items

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