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NECEvent2014_4_6_scaffold_256

Alias: 174_006_scaffold_256

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_6_scaffold_256_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..988
DNA (987bp) protein (329aa)
Oligopeptide transport system permease OppB n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBR3_9CLOT rbh
Oligopeptide transport system permease OppB {ECO:0000313|EMBL:EOR26804.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sa
binding--dependent transport system inner membrane component family protein
NECEvent2014_4_6_scaffold_256_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1004..1963
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFS4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97597.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
binding--dependent transport system inner membrane component family protein
NECEvent2014_4_6_scaffold_256_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1976..2983
DNA (1008bp) protein (336aa)
Peptide ABC transporter ATPase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CHZ7_9CLOT rbh
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EOR26806.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AA
hypothetical protein
NECEvent2014_4_6_scaffold_256_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2983..3963
DNA (981bp) protein (327aa)
Oligopeptide transport ATP-binding protein AppF n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBZ4_9CLOT rbh
Oligopeptide transport ATP-binding protein AppF {ECO:0000313|EMBL:EOR26807.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
hypothetical protein
NECEvent2014_4_6_scaffold_256_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4019..5647
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDR6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97599.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
oppA5; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
NECEvent2014_4_6_scaffold_256_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5686..5850)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3E0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97600.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_6_scaffold_256_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6083..6838)
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
Dihydrodipicolinate reductase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2K3_9CLOT
dapB; dihydrodipicolinate reductase
NECEvent2014_4_6_scaffold_256_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6848..7726)
DNA (879bp) protein (293aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H765_9CLOT rbh
NECEvent2014_4_6_scaffold_256_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7726..8718)
DNA (993bp) protein (331aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFS6_9CLOT rbh
NECEvent2014_4_6_scaffold_256_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8908..9159
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97604.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
small acid-soluble spore protein alpha/beta family protein
NECEvent2014_4_6_scaffold_256_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9240..10004
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3E2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97605.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
S-adenosylmethionine-dependent methyltransferase
NECEvent2014_4_6_scaffold_256_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10006..10887
DNA (882bp) protein (294aa)
33 kDa chaperonin n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CCU0_9CLOT rbh
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1202534 species="Bacteria; Firmicutes; Clostr
hslO; Hsp33-like chaperonin
NECEvent2014_4_6_scaffold_256_13
unknown

Not on your lists

11068..11172
DNA (105bp) protein (35aa)

This feature has no annotations

NECEvent2014_4_6_scaffold_256_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11499..11942
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97165.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_6_scaffold_256_15
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12070..12711)
DNA (642bp) protein (214aa)
Di-trans,poly-cis-decaprenylcistransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H227_9CLOT rbh
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:KEZ85279.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
Di-trans-poly-cis-decaprenylcistransferase
NECEvent2014_4_6_scaffold_256_trna_1
unknown

Not on your lists

comp(12936..13007)
DNA (72bp)
transferRNA
NECEvent2014_4_6_scaffold_256_16
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13187..13867
DNA (681bp) protein (227aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CI11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26816.1}; Flags: Fragment;; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sart
poly A polymerase
NECEvent2014_4_6_scaffold_256_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14031..14732)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDR9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97609.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_4_6_scaffold_256_18
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14860..15750
DNA (891bp) protein (297aa)
Sporulation protein YtxC n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBV8_9CLOT rbh
Sporulation protein YtxC {ECO:0000313|EMBL:EOR26777.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
sporulation protein YtxC
NECEvent2014_4_6_scaffold_256_19
unknown

Not on your lists

15710..15838
DNA (129bp) protein (43aa)

This feature has no annotations

NECEvent2014_4_6_scaffold_256_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15972..16169
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2K6_9CLOT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
50S ribosomal protein L35
NECEvent2014_4_6_scaffold_256_21
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16182..16271
DNA (90bp) protein (30aa)
50S ribosomal protein L20 n=1 Tax=Clostridium sp. CAG:221 RepID=R6G4S7_9CLOT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environ
rplT; 50S ribosomal protein L20
Displaying 22 items

View Taxonomy