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NECEvent2014_4_6_scaffold_279_5

Organism: NECEvent2014_4_6_Clostridium_7_2_43FAA-rel_29_12_partial

near complete RP 47 / 55 MC: 5 BSCG 45 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(4834..6078)

Top 3 Functional Annotations

Value Algorithm Source
PTS system, lactose/cellobiose family IIC component n=5 Tax=Firmicutes RepID=E4LTL2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 414.0
  • Bit_score: 685
  • Evalue 2.70e-194
  • rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 414.0
  • Bit_score: 685
  • Evalue 3.80e-194
celB; PTS system, IIC component similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 409.0
  • Bit_score: 468
  • Evalue 1.50e-129

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1245
ATGAAAAAGTTTATGAATTGGCTTTCAAATTCCTTTGCGCCAGGTATGAATAAGATTTGTAGTAAACCTTGGATTGCTGCAGTTTCATCTTCTATGCAAAAAATAATACCATTTATCTTAACAGGTTCAGTAATTTATTTTTATAATGTATTTAGATCTTACATACCTCAATTACCAGATTTAGGTATGATTGCAGACTATAGTTTTGGACTAATATCATTAATTATTGCATTTATGGTAGCACAACAAGTTATGGAGAAACTAGGAAAACCATTCTATACTACAAATTGTGGATTGGTTGCCATTGCAGTACTAATCATGTTTGTCATGCCTACATATGATGAAGCTGGAAATATGATTATTACCGGTGGAAGATTAGGAGCAACTGGTATTGCAGTTGGTATTTTTGCTGGATTATTTACAGCTATAATTTTTAATCTTTATTCTAAATTACATGTATTAGAAAACTCAACAAAAATCCCTGACTTTGTAACAGGATGGATAAATTATATTATTCCTACTATAATTACCTTAGGAATTGGAATGATTCTTACAAGAGATTTAGGAATGGATATTTTTGAAATGGTATTATGGATATTCTCACCATTACAAAGTTTTGGACAAACTTGGTATGGATTTATATTACTTTGCTTTATTCCTGCATTCTTATATACAATGGGTATATCTTCTTGGTTATTTGGAGCAGTTTCAACACCAATATACTTAGCTGGTATACAAGCAAATATTGAAGCAGTTGCAAATGGCCTTGCACCAACAAACATCGCTACTAGTGAAACCGTATTCACAGCTGCACTAATTACAATGGGTGGTATGGGAGCAACACTTGGCCTTAATGTATTAATGGCATTCTCAAAATCATCTCGTTTAAAAACATTAGGAAGAATTTTTATTGGACCTTCTATTTTCAACATAAATGAACCAATTATGTTTGGAGCTCCAATTGTATTTAATCCAATATTAATGTTACCTATGTGGATTAATACCATTGTTGGACCAGCAATTGTATACTTTATTATGAGAATAGGTTGGTTAAATATCCCAGCAACATTAAATCAAGTTGGACAGGTGCCAGTGCCTATTTCAACAGTTATGATTACACAAGATATGAGAGGAATTCTTTGGGCTGTTGTATTATTCATTGTGTACTTAATGATTTGGTTCCCATTCTTTAAGGTATATGAAAAACAATGTATGACTGAAGATGGTGAAATACAAGAAAACTAA
PROTEIN sequence
Length: 415
MKKFMNWLSNSFAPGMNKICSKPWIAAVSSSMQKIIPFILTGSVIYFYNVFRSYIPQLPDLGMIADYSFGLISLIIAFMVAQQVMEKLGKPFYTTNCGLVAIAVLIMFVMPTYDEAGNMIITGGRLGATGIAVGIFAGLFTAIIFNLYSKLHVLENSTKIPDFVTGWINYIIPTIITLGIGMILTRDLGMDIFEMVLWIFSPLQSFGQTWYGFILLCFIPAFLYTMGISSWLFGAVSTPIYLAGIQANIEAVANGLAPTNIATSETVFTAALITMGGMGATLGLNVLMAFSKSSRLKTLGRIFIGPSIFNINEPIMFGAPIVFNPILMLPMWINTIVGPAIVYFIMRIGWLNIPATLNQVGQVPVPISTVMITQDMRGILWAVVLFIVYLMIWFPFFKVYEKQCMTEDGEIQEN*