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NECEvent2014_4_6_scaffold_279

Alias: 174_006_scaffold_279

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_6_scaffold_279_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1161
DNA (1161bp) protein (387aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
Putative ATP-dependent DNA helicase RecQ n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ES52_9CLOT
Putative ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CDG02020.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauv
NECEvent2014_4_6_scaffold_279_2
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1242..2687)
DNA (1446bp) protein (482aa)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosid ase (EC:3.2.1.86 3.2.1.21)
Glycosyl hydrolase, family 1 n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SQR1_9FIRM rbh
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EFP60103.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacteri
NECEvent2014_4_6_scaffold_279_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2703..4142)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VQX2_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY88936.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostri
yckE; Beta-glucosidase
NECEvent2014_4_6_scaffold_279_4
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4454..4795)
DNA (342bp) protein (114aa)
celC.3; PTS system cellobiose-specific transporter subunit IIA (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9K7K7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS42435.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
NECEvent2014_4_6_scaffold_279_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4834..6078)
DNA (1245bp) protein (415aa)
PTS system, lactose/cellobiose family IIC component n=5 Tax=Firmicutes RepID=E4LTL2_9CLOT rbh
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
celB; PTS system, IIC component
NECEvent2014_4_6_scaffold_279_6
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6221..6586)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KG22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS42432.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
PTS system protein
NECEvent2014_4_6_scaffold_279_7
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6749..8671
DNA (1923bp) protein (641aa)
PRD domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LTL4_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDC86758.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipel
conserved protein of unknown function
NECEvent2014_4_6_scaffold_279_8
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8779..9132)
DNA (354bp) protein (118aa)
Bacterocin transport accessory protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M3U1_9CLOT
Bacterocin transport accessory protein {ECO:0000313|EMBL:EHJ00559.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-V
thioredoxin-like protein
NECEvent2014_4_6_scaffold_279_9
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9258..10652)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2X2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:KGK86433.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
NECEvent2014_4_6_scaffold_279_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10911..12233
DNA (1323bp) protein (441aa)
Amino acid permease family protein n=1 Tax=Clostridium difficile CD69 RepID=T3A2C1_CLODI rbh
amino acid transporter
Putative amino acid/polyamine transporter {ECO:0000313|EMBL:CCL30703.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pept
NECEvent2014_4_6_scaffold_279_11
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12393..13220)
DNA (828bp) protein (276aa)
PTS system, mannose/fructose/sorbose family, IID component n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CXZ5_9FIRM rbh
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:ERI95414.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral
PTS system transporter subunit IID
NECEvent2014_4_6_scaffold_279_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13210..14022)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6C5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH96570.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
NECEvent2014_4_6_scaffold_279_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14042..14518)
DNA (477bp) protein (159aa)
PTS system, mannose/fructose/sorbose family, IIB component (EC:2.7.1.69)
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH4_9CLOT
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EEH96571.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
Displaying 13 items

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