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NECEvent2014_4_7_scaffold_339_18

Organism: NECEvent2014_4_7_Veillonella_parvula-rel_39_396

near complete RP 48 / 55 BSCG 46 / 51 ASCG 12 / 38 MC: 1
Location: comp(13667..14530)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; V similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 583
  • Evalue 1.40e-163
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMC8_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 583
  • Evalue 1.00e-163
  • rbh
ribosome small subunit-dependent GTPase A similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 287.0
  • Bit_score: 583
  • Evalue 2.80e-164
  • rbh

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 864
ATGATTACAGGCATTGTTGTCAAAAATATGAATGGGTACTTTTATGTACAAGATGATACGGGCACCATTCATGAATGTAAGGTTCGTGGCAGACTTAAGAAAGGTCGTTATAGTTTACTTGTGGGTGACCGCGTTACGATTTCGGAGGATGGGTTCGTTGAATCCATCCATGGACGTCATAATTCGATGGTACGTCCAGCAGTAGCTAATATTGACCAAGTTGTATTAGTTGTGGCTGCCCATGAACCAGATATTAATGAGCTATTACTTAATAAAATGCTCGTTATGATTGAACATGCGGATATACCTATCGTGCTATGTATCAATAAATGTGACCTGATGGATTCAGAGACGGAAACTATGGTTGATCTTTATAAATCAATTGGTTATAAGGTTTTGATGACATCCACATATAATATGACAGGCATCGATGATTTACGTCATGTGCTTCAACATAAGGTAACAGCTTTTGCAGGTCCATCTGGTGTTGGTAAGAGTAGTCTTTTAAATGCAGTAGACCCAAAATTCGCCTTCCAGACTGGGGAGGTAAGTGATAAGATTAAACGTGGCAAACACACCACTCGTCACGCTTCTTTATATAGTTTAGATGCAGATTCTTTTATCATGGATACACCTGGATTTAGTGCTATTGAATTTAATGATGTTTCCCTTGAAAGATTGCCTACATTATTCCCAGAATTTGGTGAATATGTTGATACTTGTAAATTTAGTCCTTGCTATCATGAACATGAACCCATTTGTGGGATTAAAGCTGCTCTAGAAGCTGGTCATATTCATCAAGGACGATATGATGCTTATATGTCTATACGTAATGATATAGAAAGTCAACGAAAGAGGTTTTAA
PROTEIN sequence
Length: 288
MITGIVVKNMNGYFYVQDDTGTIHECKVRGRLKKGRYSLLVGDRVTISEDGFVESIHGRHNSMVRPAVANIDQVVLVVAAHEPDINELLLNKMLVMIEHADIPIVLCINKCDLMDSETETMVDLYKSIGYKVLMTSTYNMTGIDDLRHVLQHKVTAFAGPSGVGKSSLLNAVDPKFAFQTGEVSDKIKRGKHTTRHASLYSLDADSFIMDTPGFSAIEFNDVSLERLPTLFPEFGEYVDTCKFSPCYHEHEPICGIKAALEAGHIHQGRYDAYMSIRNDIESQRKRF*