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NECEvent2014_4_7_scaffold_339

Alias: 174_007_scaffold_339

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_7_scaffold_339_1
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)
UPI0003D6408D related cluster n=1 Tax=unknown RepID=UPI0003D6408D
O-methyltransferase protein {ECO:0000313|EMBL:ETI97803.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_
NECEvent2014_4_7_scaffold_339_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(282..1595)
DNA (1314bp) protein (438aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=3 Tax=Veillonella RepID=D6KHL7_9FIRM rbh
MiaB family RNA modification protein
NECEvent2014_4_7_scaffold_339_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1604..2479)
DNA (876bp) protein (292aa)
Uncharacterized protein n=6 Tax=Veillonella RepID=D1BME2_VEIPT rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGL78035.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula
NECEvent2014_4_7_scaffold_339_4
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2495..3322)
DNA (828bp) protein (276aa)
UPI0003D59D99 related cluster n=1 Tax=unknown RepID=UPI0003D59D99 rbh
PHP protein {ECO:0000313|EMBL:ETI97806.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
PHP domain-containing protein
NECEvent2014_4_7_scaffold_339_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3439..4527)
DNA (1089bp) protein (363aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:000025
Proline--tRNA ligase n=3 Tax=Veillonella parvula RepID=T0U6M8_9FIRM rbh
prolyl-tRNA synthetase
NECEvent2014_4_7_scaffold_339_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4565..5011)
DNA (447bp) protein (149aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:000025
Proline--tRNA ligase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BME0_VEIPT
prolyl-tRNA synthetase
NECEvent2014_4_7_scaffold_339_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5005..6090)
DNA (1086bp) protein (362aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hyd
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=6 Tax=Veillonella RepID=D1BMD9_VEIPT rbh
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
NECEvent2014_4_7_scaffold_339_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6109..7125)
DNA (1017bp) protein (339aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillon
Membrane-associated zinc metalloprotease n=3 Tax=Veillonella RepID=D1BMD8_VEIPT rbh
membrane-associated zinc metalloprotease
NECEvent2014_4_7_scaffold_339_9
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7134..8279)
DNA (1146bp) protein (382aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KHL1_9FIRM rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase
NECEvent2014_4_7_scaffold_339_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8298..9122)
DNA (825bp) protein (275aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonell
Phosphatidate cytidylyltransferase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMD6_VEIPT rbh
phosphatidate cytidylyltransferase
NECEvent2014_4_7_scaffold_339_11
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9126..9890)
DNA (765bp) protein (255aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Vei
Isoprenyl transferase n=2 Tax=Veillonella RepID=D1BMD5_VEIPT rbh
UDP diphosphate synthase rbh
NECEvent2014_4_7_scaffold_339_12
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9871..10122)
DNA (252bp) protein (84aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=D1BMD4_VEIPT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFG23605.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_
NECEvent2014_4_7_scaffold_339_13
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10122..10682)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=2 Tax=Veillonella RepID=D1BMD3_VEIPT rbh
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=457416 species="Bacteria;
NECEvent2014_4_7_scaffold_339_14
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10688..11413)
DNA (726bp) protein (242aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=2 Tax=Veillonella RepID=D1BMD2_VEIPT rbh
uridylate kinase rbh
NECEvent2014_4_7_scaffold_339_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11476..12156)
DNA (681bp) protein (227aa)
Elongation factor Ts n=5 Tax=Veillonella RepID=D1BMD1_VEIPT rbh
translation elongation factor Ts rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Seleno
NECEvent2014_4_7_scaffold_339_16
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(12255..12761)
DNA (507bp) protein (169aa)
30S ribosomal protein S2 n=4 Tax=Veillonella RepID=D1YR20_9FIRM
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;
NECEvent2014_4_7_scaffold_339_17
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13015..13665)
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellacea
Ribulose-phosphate 3-epimerase n=3 Tax=Veillonella RepID=D1YR19_9FIRM rbh
ribulose-phosphate 3-epimerase
NECEvent2014_4_7_scaffold_339_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13667..14530)
DNA (864bp) protein (288aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; V
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMC8_VEIPT rbh
ribosome small subunit-dependent GTPase A rbh
NECEvent2014_4_7_scaffold_339_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14539..16731)
DNA (2193bp) protein (731aa)
Kinase domain protein n=4 Tax=Veillonella RepID=D1YR17_9FIRM rbh
Serine/threonine protein kinase with PASTA sensorS {ECO:0000313|EMBL:ETI97820.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="V
serine/threonine protein kinase with PASTA sensor(s)
NECEvent2014_4_7_scaffold_339_20
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16724..17770)
DNA (1047bp) protein (349aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Probable dual-specificity RNA methyltransferase RlmN n=4 Tax=Veillonella RepID=D1YR15_9FIRM rbh
radical SAM enzyme, Cfr family
NECEvent2014_4_7_scaffold_339_21
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17789..19144)
DNA (1356bp) protein (452aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales
Ribosomal RNA small subunit methyltransferase B n=3 Tax=Veillonella RepID=D1YR14_9FIRM rbh
sun protein
NECEvent2014_4_7_scaffold_339_22
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19125..19919)
DNA (795bp) protein (265aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=D1BMC3_VEIPT rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGL78095.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula
NECEvent2014_4_7_scaffold_339_23
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19903..20880)
DNA (978bp) protein (326aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=479436 species="B
Methionyl-tRNA formyltransferase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMC2_VEIPT rbh
methionyl-tRNA formyltransferase
NECEvent2014_4_7_scaffold_339_24
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20906..21394)
DNA (489bp) protein (163aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMC1_VEIPT rbh
peptide deformylase rbh
NECEvent2014_4_7_scaffold_339_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21408..23591)
DNA (2184bp) protein (728aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=686660 species="Bacteria; F
Primosomal protein N n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YR10_9FIRM rbh
primosomal protein N'
NECEvent2014_4_7_scaffold_339_26
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23654..24844)
DNA (1191bp) protein (397aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=6 Tax=Veillonella RepID=D1BMB9_VEIPT rbh
S-adenosylmethionine synthetase
NECEvent2014_4_7_scaffold_339_27
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25039..26406)
DNA (1368bp) protein (456aa)
Sulfate permease n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YR08_9FIRM rbh
Sulfate permease {ECO:0000313|EMBL:EFB85031.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
sulfate transporter
NECEvent2014_4_7_scaffold_339_28
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26457..27662)
DNA (1206bp) protein (402aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KHJ3_9FIRM rbh
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EFG23590.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellacea
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
NECEvent2014_4_7_scaffold_339_29
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27715..27930)
DNA (216bp) protein (72aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=6 Tax=Veillonella RepID=D1BMB6_VEIPT
DNA-directed RNA polymerase subunit omega
NECEvent2014_4_7_scaffold_339_30
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27935..28564)
DNA (630bp) protein (210aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase n=4 Tax=Veillonella RepID=T0T2K7_9FIRM rbh
guanylate kinase
Displaying items 1-30 of 95 in total

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